Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g1535 ATGGCAGAGGAACTTGACCTGAACAACCTTAAGGCACTGAAAGTTTTAGGCAAAGGAGCCATGGGCACCGTGTTTCTCGTGCAACACAACTCCCACCATGTGGCACTCAAAGTCGTTGACAAATCAGCATCCCTCCACGACGGCGCTCGCCGCGCCCACTGGGAACTCACCGTTCTCTCTCGCTTATCGCACCCCTTCCTCCCCACCCTATTGGGTTCCTTCGAGTCCAACAACTTAATGGGCTGGGCAGTCCCCTACTGCCCCGGCGGCGACCTCAACCACCTCCGCTACCGCCAAACAGACCACGTATTCTCCCCCGCCGTCGTCCGCTTCTACCTCGCCGAGATCCTCTGCGCCCTCCACCACCTCCACTCCATGCACATCGCATACCGCGACCTCAAACCCGAAAACGTCCTCATCCAACAATCCGGCCACGTCACCCTCACCGACTTCGACCTCTCCCGAACCCTCTCTCCCACCAAAACCAACACCTCTCCCTCCAAATCCCACATTCCCGACACCGCTCCACGCAAACCCCGCCGCAACTTCCGCTGGGCACCACTCGCCAAGGCCCCCAAGTCCGCCCGAGTCACCCCCGCCGCTCGCCGCGCCGCGCTGAGCTTCGAGCGCTCGAAGTCGTTCGTGGGCACCGAGGAGTACATCGCGCCGGAGGTCCTCCGAGACGAGGGGCACGGCTTCGCCGTCGACTGGTGGGCCCTCGGCGTCCTCGCCCACGAGATGGTCTACGGAACGACGCCGTTCAAGGGGAAGAATCGCAAGGAAACGTTTCGCAACGTGTTGTTGAAGACGCCGGAGTTTGTTGGGAAGAAAACAGCGTTGACGGACCTAATCTCTCAGCTGCTCGAAAAGGACCCTTCCAAGCGTTTGGGTTATGTTCGCGGCGCCACCGAGATCAAGGAGCACGAGTTCTTCAGAGGCGTTAAGTGGGACCTACTAACGGAGGTTATGCGGCCGCCGTTTATCCCTTCAAGAGACGACGTCACGATGCCTTTCGCCGACGGACTCGACATAAGGGGATACTTCCAGAGCTTGAAATCTCCGCCGTCTTTGCCGCCTTCGCCGTTACGGTCACCGTCGTTTGAGTTTCAGAAGAATGTTTCTTTACCGGAATTCTGA 1137 0.5919 MAEELDLNNLKALKVLGKGAMGTVFLVQHNSHHVALKVVDKSASLHDGARRAHWELTVLSRLSHPFLPTLLGSFESNNLMGWAVPYCPGGDLNHLRYRQTDHVFSPAVVRFYLAEILCALHHLHSMHIAYRDLKPENVLIQQSGHVTLTDFDLSRTLSPTKTNTSPSKSHIPDTAPRKPRRNFRWAPLAKAPKSARVTPAARRAALSFERSKSFVGTEEYIAPEVLRDEGHGFAVDWWALGVLAHEMVYGTTPFKGKNRKETFRNVLLKTPEFVGKKTALTDLISQLLEKDPSKRLGYVRGATEIKEHEFFRGVKWDLLTEVMRPPFIPSRDDVTMPFADGLDIRGYFQSLKSPPSLPPSPLRSPSFEFQKNVSLPEF* 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g1535 378 MobiDBLite consensus disorder prediction 157 171 - -
Pvu5g1535 378 PANTHER FLIPPASE KINASE 1-RELATED 5 355 - -
Pvu5g1535 378 PANTHER SERINE/THREONINE-PROTEIN KINASE UCNL 5 355 - -
Pvu5g1535 378 ProSitePatterns Serine/Threonine protein kinases active-site signature. 128 140 IPR008271 GO:0004672|GO:0006468
Pvu5g1535 378 MobiDBLite consensus disorder prediction 157 179 - -
Pvu5g1535 378 Gene3D Transferase(Phosphotransferase) domain 1 91 163 - -
Pvu5g1535 378 Pfam Protein kinase domain 12 165 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu5g1535 378 Pfam Protein kinase domain 211 311 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu5g1535 378 Gene3D Transferase(Phosphotransferase) domain 1 208 330 - -
Pvu5g1535 378 SUPERFAMILY Protein kinase-like (PK-like) 7 363 IPR011009 -
Pvu5g1535 378 SMART serkin_6 10 311 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu5g1535 378 ProSitePatterns Protein kinases ATP-binding region signature. 16 37 IPR017441 GO:0005524
Pvu5g1535 378 Gene3D Phosphorylase Kinase; domain 1 10 90 - -
Pvu5g1535 378 ProSiteProfiles Protein kinase domain profile. 10 311 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g1535 Pvu-Chr5 37632542 37634056 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu5g1535 3 378 AGC Kinase Gene Family AT3G20830 57.673 1.08e-144 414
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Pvu5g1535 Pkinase 1.2e-33 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g1535 - K08286 gmx:100802613 557.755
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g1535 5 37632542 37634056 Pvu5g1535 5 37632542 37634056 ECH
Pvu5g1535 5 37632542 37634056 Pvu11g0595 11 4993522 4994787 PCT