Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g1529 ATGGAGGTCCGTTACAATAACATCTGCTATCCCTACAGTACAGCAGGAAGCTTTATTGAATATGTTGAAGGTCTTACATACGAACATGTTAACTTCATTTTTTCTGGCGCTTCACTTCCTCAGGAGAGTTTATACCCTTCAAGTTCAACTACAAACTTTTACAAATCTGGGCTATCTGAACCAGGTAGTACCTCGTACTATCAGGATAGTAATGGTTACGAGGTGAATTATTATGAACAATTGGTGGATGAGTATAGAAGGCACTCGGAAAACTCTGCAACAATCAATGAACAGATGACAACAGTATGTATAGAAAGGGAAGAAGGAGTAAACAATGTCACACTAGACAGTTCTATTGAATGTCCACGAAGGCATCATAATGATTTCAATGATTATGAGGAACTACTTGAATTAGGTGAGACAGTTGGAACTGAGAGTCGTGGTCTCTCCCAAGAACAAATCTCATCGATTCCAATATCAAAGTACAAGTGTGGCCGTTTCTTCTTCTTTAGGAGGAAGTCACGGGAGGAGAGATGCGTGATTTGTCAGATGGAATATAGAAGAGGGGACAAGAGGATGACTTTACCATGCAAACATGCCTATCATGCTAGCTGTGGGAACAAATGGCTTAGCATCAATAAGGCTTGCCCTATGTGTTACAGGGAGGTGATTGTGGACGTGCCAAAACACAAATAA 696 0.4066 MEVRYNNICYPYSTAGSFIEYVEGLTYEHVNFIFSGASLPQESLYPSSSTTNFYKSGLSEPGSTSYYQDSNGYEVNYYEQLVDEYRRHSENSATINEQMTTVCIEREEGVNNVTLDSSIECPRRHHNDFNDYEELLELGETVGTESRGLSQEQISSIPISKYKCGRFFFFRRKSREERCVICQMEYRRGDKRMTLPCKHAYHASCGNKWLSINKACPMCYREVIVDVPKHK* 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g1529 231 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 1 227 IPR033276 GO:0004842|GO:0016567|GO:0046621
Pvu5g1529 231 SMART ring_2 179 219 IPR001841 -
Pvu5g1529 231 Pfam Ring finger domain 178 219 IPR001841 -
Pvu5g1529 231 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 138 225 IPR013083 -
Pvu5g1529 231 ProSiteProfiles Zinc finger RING-type profile. 179 219 IPR001841 -
Pvu5g1529 231 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 1 227 - -
Pvu5g1529 231 SUPERFAMILY RING/U-box 173 226 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g1529 Pvu-Chr5 37581715 37586245 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu5g1529 2 224 C3H Transcription Factor Family AT3G63530 36.667 3.52e-43 144
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g1529 K19045 - gmx:100793907 337.421
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g1529 5 37581715 37586245 Pvu11g2218 11 49775939 49781917 ECH
Pvu5g1529 5 37581715 37586245 Pvu5g1529 5 37581715 37586245 ECH
Pvu5g1529 5 37581715 37586245 Pvu11g0604 11 5096103 5100848 PCT