Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g1523 ATGGAGTACTCTGCAGAATCTTTGGGAAGAGATCTTAAGAGCGTGAGGAAGTACTTCGGGAGTGGAAAAACAAAGGAAGAATCATGGAGAGAATCACAGCTTAAAGGGTTGCAAAATTTTCTAGTTGAAAGAGAGGAAGAAATTCTGAGGGCCCTCAAGAAAGACTTGGGAAAGCATTATGTGGAGGCCTTCAGAGATGAGGTAGGAACGTTGGGAAAGGCCTTAAACTTCGCCAAAAAGCATTTGAAGAAATGGATGGCGGGGGAAGAGGCTAAATTGCCAAAAATAGCACTGCTTTCAAGTGCTGAGATAGTTCCTGAGCCACTTGGTCTTGTTCTCATAATCTCATCATGGAACTTCCCCTTTGGACTTTCCTTGGAGCCACTGATAGGAGCAGTAGCTGCTGGAAACACTGTAGTTCTAAAGCCTTCAGAGATGTCCCCCACTTGCTCTTCTCTTTTAGCCACTGTCCTCCCAACTTACTTGGACAACAATGCCATTAAGGTCATAGAAGGTGGACCAGAAGTGGGGAAGCTACTCTTAGAGCAACAATGGGACAAGATTTTCTTCACAGGAAGTGCAAGGGTGGGAAGGATTGTTATGTCTGCTGCTTCTGTGCATCTTACTCCAGTGACTTTGGAGCTTGGTGGAAAATGTCCAGCACTGGTTGATTCTCTTACTTCCTCTTGGGACAGAGAGGTGGCTGTGAAACGAGTTTTGGTGGCAAAATTCGGGGCTTGTGCAGGACAAGCATGCATAGCAATCGATTATGTCCTTGTAGAGAAGAGTTTCAGTTCTACATTGGTGACATTGATGAAGGCTGGGATTAAGAAAATGTTTGGAGAAAATCCGAAAGAGTCCAACACTGTTGCAAGGATAGTTAACCACAAACATTTCATGAGACTCAAGAATCTTCTCACTGATCCAAGGGTCAAAGACTCGGTGGTTTATGGTGGTTCAATGAACGAGAAGGACTTATTTATTGAACCCACGATATTGCTGAATCCCCCACTTGATTCACCAATCATGGCTGATGAAATCTTTGGCCCAGTTCTTCCAATCATCACTGTGGAGAAGATTGAAGACAGTATAGAGTTCATAAACTCAAGGCCTAAACCATTAGCAATTTATGCCTTCACGAAAAACAAAACTCTGCATAAAAGACTGCTATCTGAAACATCATCCGGAAGTCTTGTTTTCAACGATGCAATTCTACAGTACGTAGTGGATACCTTGCCATTTGGAGGAGTTGGTGAATGTGGGTTTGGCAAGTACCATGGAAAGTTCTCCTTTGACGCGTTCAGTCACCACAAGGCTGTGGCAAGAAGAAGTTACTTCACTGATTTTTGGTATAGGTTTCCTCCATGGACTCTTAACAAGCTACAACTACTTGAGGTGTCCTACAACTTGGATTATCTTGGGATACTTCTAGTTCTGCTTGGCTTAAAGAGGTCAAAAAGGTCCTTAGATTAG 1473 0.4338 MEYSAESLGRDLKSVRKYFGSGKTKEESWRESQLKGLQNFLVEREEEILRALKKDLGKHYVEAFRDEVGTLGKALNFAKKHLKKWMAGEEAKLPKIALLSSAEIVPEPLGLVLIISSWNFPFGLSLEPLIGAVAAGNTVVLKPSEMSPTCSSLLATVLPTYLDNNAIKVIEGGPEVGKLLLEQQWDKIFFTGSARVGRIVMSAASVHLTPVTLELGGKCPALVDSLTSSWDREVAVKRVLVAKFGACAGQACIAIDYVLVEKSFSSTLVTLMKAGIKKMFGENPKESNTVARIVNHKHFMRLKNLLTDPRVKDSVVYGGSMNEKDLFIEPTILLNPPLDSPIMADEIFGPVLPIITVEKIEDSIEFINSRPKPLAIYAFTKNKTLHKRLLSETSSGSLVFNDAILQYVVDTLPFGGVGECGFGKYHGKFSFDAFSHHKAVARRSYFTDFWYRFPPWTLNKLQLLEVSYNLDYLGILLVLLGLKRSKRSLD* 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g1523 490 Pfam Aldehyde dehydrogenase family 26 440 IPR015590 GO:0016491
Pvu5g1523 490 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 217 420 IPR016163 GO:0016620
Pvu5g1523 490 PANTHER ALDEHYDE DEHYDROGENASE 6 489 IPR012394 GO:0006081
Pvu5g1523 490 PIRSF ALDH 2 476 IPR012394 GO:0006081
Pvu5g1523 490 PANTHER ALDEHYDE DEHYDROGENASE 6 489 - -
Pvu5g1523 490 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 16 438 IPR016162 GO:0016491
Pvu5g1523 490 SUPERFAMILY ALDH-like 13 457 IPR016161 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g1523 Pvu-Chr5 37531083 37534056 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu5g1523 1 484 Aldehyde Dehydrogenase Gene Family AT4G36250 54.339 0.0 566
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g1523 K00128 - gmx:100798020 833.943
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g1523 5 37531083 37534056 Pvu5g1523 5 37531083 37534056 ECH
Pvu5g1523 5 37531083 37534056 Pvu11g0611 11 5164143 5167484 PCT