Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g1510 ATGAGAGTCAAAGGAGGGATGAGAGAACAAAGCTTTGGAGATAAGATGCATGGAATGACAACAACTCTCCCTCTCACTGCGAACCCCTTTCTTTGTTTTGCCAACACTCACCTTTCTCTCAGATCTCTTCCATCAACTTTTTGCATACCCACTTCTAAAATTAGCTATGCAACTCGTTTTCACCATTCACAGTGGAAGCACCAGAAGAAAGAAAGATGGGGCAAAAGAATCATGGTGGTGAGAGCAAGGCGTGGCGAGTCTCCGTACGAAGTTCTGGGTGTGTCTCCATCTGCAACTGTCCACGAAATCAAAAGGGCGTATCGGAAACTTGCTCTTAAGTATCATCCTGATGTCAATAAAGAGGAGAAGGCACAGGAGAAATTTATGAGGATAAAACATGCATACAATACATTGCTAAATTCCAGTTCTCGCAAAAGATATGATTCTGGAAGTCGAGGTTATGATTTTTCTCAAGGAAGCCAAACTAGGAATGCACAACCTGAAGAAGAATTTTATGGACTAGGTAATTTTTTGAGGGATGTTCAAATAACAATAGAGGACTTCTTTAAGGATCTTCAAGAAGAATTCAGGAATTGGGAAGCAAACGCTGCTTCACAAGGAAAGCCAAAGAGTCTATGGGAGGAATTGGCGGAAATAGGAGAAGAATTTGTTGAGTTCCTTGAGAAAGAACTCAATATTACAGATAAAAATGATGATTACAAGACACCTTATGGAGGAAATGCCTCCAACTTTTCTGGGAGGGAGACACCAAGCAATAGTAGTAGTCCTGGTGAAGCCAGCAAGGGAAACAAAAGTGTTGAGGATAACCTCGATGAAATAGAAGCCACTCTGAATCAGTTGAAAAAGGAATTAGGCTTGTAG 882 0.4116 MRVKGGMREQSFGDKMHGMTTTLPLTANPFLCFANTHLSLRSLPSTFCIPTSKISYATRFHHSQWKHQKKERWGKRIMVVRARRGESPYEVLGVSPSATVHEIKRAYRKLALKYHPDVNKEEKAQEKFMRIKHAYNTLLNSSSRKRYDSGSRGYDFSQGSQTRNAQPEEEFYGLGNFLRDVQITIEDFFKDLQEEFRNWEANAASQGKPKSLWEELAEIGEEFVEFLEKELNITDKNDDYKTPYGGNASNFSGRETPSNSSSPGEASKGNKSVEDNLDEIEATLNQLKKELGL* 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g1510 293 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 59 291 - -
Pvu5g1510 293 SUPERFAMILY Chaperone J-domain 51 147 IPR036869 -
Pvu5g1510 293 SMART dnaj_3 86 143 IPR001623 -
Pvu5g1510 293 Gene3D DnaJ domain 85 205 IPR036869 -
Pvu5g1510 293 MobiDBLite consensus disorder prediction 145 167 - -
Pvu5g1510 293 MobiDBLite consensus disorder prediction 236 278 - -
Pvu5g1510 293 PRINTS DnaJ domain signature 89 107 IPR001623 -
Pvu5g1510 293 PRINTS DnaJ domain signature 107 122 IPR001623 -
Pvu5g1510 293 PRINTS DnaJ domain signature 123 143 IPR001623 -
Pvu5g1510 293 ProSitePatterns Nt-dnaJ domain signature. 128 147 IPR018253 -
Pvu5g1510 293 MobiDBLite consensus disorder prediction 243 269 - -
Pvu5g1510 293 MobiDBLite consensus disorder prediction 145 168 - -
Pvu5g1510 293 PANTHER DNAJ HOMOLOG 1, MITOCHONDRIAL-RELATED 59 291 - -
Pvu5g1510 293 Coils Coil 270 293 - -
Pvu5g1510 293 Pfam DnaJ domain 88 148 IPR001623 -
Pvu5g1510 293 CDD DnaJ 88 140 IPR001623 -
Pvu5g1510 293 ProSiteProfiles dnaJ domain profile. 87 151 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g1510 Pvu-Chr5 37445454 37449103 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu5g1510 89 149 C2H2 Transcription Factor Family AT1G74250 40.299 3.82e-07 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g1510 - - gmx:100812972 446.432
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g1510 5 37445454 37449103 Pvu5g1510 5 37445454 37449103 ECH