Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g1499 ATGCTTTCCACCAACTCTCTCCTGCAAAATTTTGGAGGTTCTATCTCGGTGTTTTCAGATCAGAACCAAGTGGCGGAGGGGATTGAGTTTGATGATTCATCTTCTCCTTCTTCTGGTACAAGCTCAAGTGGAGAATCGACCAAGTACTCTAACAACATCCTTAGATACATAAGCGACATCCTCATGGATGAGGAAGACGACCTGGAGAGCAAACCCTGCATGTTGGAGGAATGTTTGAGACTCCAGGCTGCTGAAAAATCCTTCCTTGATGTCCTTGTCCATCGCAGTTCTTCTTTCAGTGGTGAAATCGTAGACCCTGATGAAAATTTTGGTCGCACTGCTAGTTTTGAGAGCAATGGCAGCTGCACTACTGAGAATTCATGTGACTCTGACTTGGTCAACGGTGTGGGTGAATTTGACTCTTCTTTTCTATTACAGCAAACCCATCTAGTTTATTCCCCAGATGTAGTTGATGCATTTAGGGCTCGTGATGGAACCTGGAATCTCGTTCAGTCTCATACAAAGCCGGTGATGGTGGAAGAGGGTTGTTCAGGTTCAGCATCCAGAGAAAAGAGAAGCCATCAGAATGATGATGGTTTTCATGAACAAGAAGGAAGAAGAGGCAGCAAGGTTTCAGCTGTGTTTTCTGATGAGTTAGAGCCGCCAGAGATCTTAGATGAGCTGTTGCTTTGTCAAATTGGAAGAAGTGGATCTGGTTCTGAACCATCACAAGGTGTTGATTTAAGAGGGTCCAATGGAAAGGCAACACGCACACGTCCAAAGAAAGGGTCCACCAAAGCAGGTACAGCAGCTGTTGACTTATGGACCCTTCTAACTCAATGTGCACAGGCAGTGGCAAGCTTTGACCAAAGGAATGCAAATGAGTTACTCAGCCAGATTAGGCAACACTCTTCACCTTATGGGGATGGACTCCAGCGTTTGGCTCATTACTTTGCCAATGGCCTTCAGATAAGGTTGGCTGCTGGGACGCCATCATATGTGCCACTGGAAGTGGCAACTGCTGCTGATATGTTGAAAGCTTACAAATTATTTGTTACATCCTCTCCTTTGCAAAGGATGTCAAATTATTTGGCAACCAAGACCATCATTAGTCTTGTGAAAAATGAGAGCAGCGTTCATATTATTGACTTTGGCATTTGCTATGGTTTTCAGTGGCCCTGCCTCCTCAAAAGGCTCTCAGAAAGACAGGGTGGTCCTCCAAGGCTTCGTATAACAGGAATTGATCTTCCTCGGCCAGGATTTCGGCCTGCTGAAAGGGTTGAGGAGACAGGGCGGCGTTTGGAAAACTACTGCAAGAAGTTCAATGTCCCTTTTGAGTACAATTGCCTTGCACAGAAATGGGAAACTATAAAACTTGCAGATCTCAAGCTAGACGCGAATGAAGTGACTGTTGTTAGCTGTTTCAACCGGCTGAAGAACCTGCCAGATGAAACTGTGGCAGTGAACTGTCCAAGAGATGCAGTGTTGAAGTTGATTAGGAAGATCAATCCAAACATCTTCATCCATGGGGTGGTCAATGGCTCTTATAGTGCACCTTTTTTCCTGACACGGTTCAGGGAAGCGCTGTACCACTTCTCATCACTGTTTGATATGTTTGAGGTTAATGTACCTCGTGAAGACTCGCAAAGAGTGATGTTTGAGAAAGGGTTGCTTGGAAGAGATGCCATGAATGTTATAGCGTGTGAGGGGGCTGAGAGAGTTGAGAGACCGGAGACCTACAAGCAGTGGCAGGTTAGGAACCTGAGAGCTGGGTTTAAACAAGTTCCTTTGGATCCTGAGTTGGTGAATTATGCTAAACAAATGGTGAAGAACGAATATCACAAAGATTTTGTAGTGGCTGAGGATGGCAAGTGGATTTTGCAGGGGTGGAAAGGGCGAATTCTGAATGCCATTTCTGCATGGGCTCCTGCTTGA 1935 0.4548 MLSTNSLLQNFGGSISVFSDQNQVAEGIEFDDSSSPSSGTSSSGESTKYSNNILRYISDILMDEEDDLESKPCMLEECLRLQAAEKSFLDVLVHRSSSFSGEIVDPDENFGRTASFESNGSCTTENSCDSDLVNGVGEFDSSFLLQQTHLVYSPDVVDAFRARDGTWNLVQSHTKPVMVEEGCSGSASREKRSHQNDDGFHEQEGRRGSKVSAVFSDELEPPEILDELLLCQIGRSGSGSEPSQGVDLRGSNGKATRTRPKKGSTKAGTAAVDLWTLLTQCAQAVASFDQRNANELLSQIRQHSSPYGDGLQRLAHYFANGLQIRLAAGTPSYVPLEVATAADMLKAYKLFVTSSPLQRMSNYLATKTIISLVKNESSVHIIDFGICYGFQWPCLLKRLSERQGGPPRLRITGIDLPRPGFRPAERVEETGRRLENYCKKFNVPFEYNCLAQKWETIKLADLKLDANEVTVVSCFNRLKNLPDETVAVNCPRDAVLKLIRKINPNIFIHGVVNGSYSAPFFLTRFREALYHFSSLFDMFEVNVPREDSQRVMFEKGLLGRDAMNVIACEGAERVERPETYKQWQVRNLRAGFKQVPLDPELVNYAKQMVKNEYHKDFVVAEDGKWILQGWKGRILNAISAWAPA* 645
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g1499 644 MobiDBLite consensus disorder prediction 236 265 - -
Pvu5g1499 644 Pfam GRAS domain family 276 641 IPR005202 -
Pvu5g1499 644 ProSiteProfiles GRAS family profile. 265 642 IPR005202 -
Pvu5g1499 644 MobiDBLite consensus disorder prediction 178 209 - -
Pvu5g1499 644 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 14 642 IPR005202 -
Pvu5g1499 644 MobiDBLite consensus disorder prediction 236 251 - -
Pvu5g1499 644 MobiDBLite consensus disorder prediction 185 209 - -
Pvu5g1499 644 PANTHER GRAS FAMILY TRANSCRIPTION FACTOR 14 642 - -
Pvu5g1499 644 MobiDBLite consensus disorder prediction 28 47 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g1499 Pvu-Chr5 37374967 37377398 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu5g1499 49 643 GRAS Transcription Factor Family AT2G29060 44.872 4.38e-170 499
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Pvu5g1499 GRAS 1.7e-111 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g1499 - - aprc:113855970 988.408
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g1499 5 37374967 37377398 Pvu5g1499 5 37374967 37377398 ECH
Pvu5g1499 5 37374967 37377398 Pvu11g0647 11 5460410 5462467 PCT