Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g1485 ATGGGAAAGGACGTGATTTCTTCCGACCAGACCGCTATTCAAATTCAGGACAATAATCCAGGATGCATGTGGGGCATGCTTAAAATTCTTGATTACCATCGTTGGCGCGTAAAAAAGGTGTTTCCTCAAAAAAGGAGAAGACATGTCACATATAAGAGAAAATCCATTTTGTATGACCAACTTGAAGACCAACAAGATGGAGTTTCAGAAGCAGAACCCCTCCTGGTCAGGCAACATAGCGAAAAATTGCATGCTGCAGACAAAAGTTCTCCCAAATATCGCCAAAAGGAAGCACGAACTGGTAAAAAGTTTGACAAAGAAAACTCCAAAGGCAACAAAGCCTACTCGAGGAAAAACCAAGACAGTAGTGAGTATGCGCTTCATCTGGAAAAGGATGGCAAGACAACAGAAGCTTCCCTTGACCATAAGCCTACGGACAGTTCCTACAATTTTGAGAAACATTCTGATGTTTTTGAGTTTCTTAGGGTGGAGAAGGATTTATTACTTAAATTTCTACGGGACATGGACTTTAGTGGGAAAAAACTCCATCAACCTTCCCAAACCAAAGCAAGATTGACAAAATGTGGGTCATTTCCTTTAGCATCAACTTCACAGATGAGGAACATTAGCTCTAGGTCCTTAAAACACAAGCAAAATGAAATTTATCCAAAGGGAGAATTTTTTTTTGCGGGTACCCAAGAATCAAACATGTCCGTGTCCAGTGTGAAGAAAGATGTTTCTTATGAGAAGCCACTAACTTTAGTGAGTGATCTTGGTGTGGATAGTGCCATGAAACAAAAAGCAATCATTTCTTCAAAGTCTTCTCAGGAATCAAATCACAGAGGGTGGAATCAATTGGTTCTTCATCAATTCAAAGCTATAAAACAGAAGATAAAACATGCTCTTGTGGAATTCAGAAAAAGTAGTTACCAAACTTCTGCTGAAGCTATCCACCACAGAGCTTCACCTGAATATAGCATCATCAATAATGACGAAGAGATCTCACGAACTTTGGAAGATGGTGTGGTTCAAGAATACAAAAGGAGCAAAAGCTCAAATGAAACTAAAGCTTCTGATTATGATTCCAACAAACATGATGCCCGGCTCATGCGGAGAACATCTTCTCTGAATGAATCATTGGATAGATATACTCAGTTGTTCGAGAAAAGCTTCAGCAAAGAAGCTAAGTGGCAAAGCTCAAAGTCTAAAAGCTTAAAATTGACACACGAGGATAAGATCCACAAGAGTGCTCATGTTCCCAAGTTTTCAAGAAGCAATTTCTCTATGCCTAATCTCGAGACTTTAGGCTTCATTGTACAAGAGGCACTTTTTAATACAAATGATATAGGGACCGAGGAAACTTATGATCGTGTTCACAGAAAATCAGTGAGTCTTCCTTTAAAGATGGACAAATCACTTGATAACTTTAAAGAGGCTGAAATTGTGGAAACAGATAAGATTTTGGAGAAAATTGATGAAGTTACCTATGACCAAAAGGAGGACATGGATGAGCCAGCAGTGGGGGATGGATGTTTTACCCAAGAAAAAGAGGAAATGAGTAATATGACTGCCTATCTGAGCAAGGAGGTGACGCCAACTCTTGAAACTAGCTCCGAGGACAATATAACCAGCCATGCAGAAGGCACAGAATTGTATACCCGAGTCTCTACATTGGAAGAATTGGAAACTGATTTATCAGACAAAGGAAGTGTATGGCCAGACTCTTCATCCAACAGAAATGCAAGTGTAGTGACAGCTGAAGATACAGATTACCCTTCCAATTTCAAATATGTGAAAAAAGTTCTTGAATATTCAGGATTCTTGGGAAATGAGCACACTCAGATGCGATACACAATAGACCAGCCACTAAAGCCCTCCTTGTTCAAAGATTTGGATGAGAGTTTGAGCCATGAAATTGAACCCTCTGAAGAAGAGACGATGAACCCTTATGATCATCAACTCATTTTTAACTTAGTGAACGAGGTGCTGCTCGAAATTTATGGAAGATCACCAACCTACTTCCCAAGACCATTCTCCTTCAACCCCCGCCTCCATCCAATGCCTAAAGGGCGGTATCTTCTGAATGAAGTGTGGAGCAGTGTTAATTCATACATGACCTTGAGACCTGAGCTAGATCAGACATTAGATGATGTTGTAGGTCGTGATTTGGCAAAAGGAAGAGGGTGGATGATCCTTCAAGAGGAAGAGGAGTATGTAGGACTTGAACTAGAAGAGATGATAATGGATGATTTGTTAGATGAATTCATGTTCTCATGA 2277 0.4005 MGKDVISSDQTAIQIQDNNPGCMWGMLKILDYHRWRVKKVFPQKRRRHVTYKRKSILYDQLEDQQDGVSEAEPLLVRQHSEKLHAADKSSPKYRQKEARTGKKFDKENSKGNKAYSRKNQDSSEYALHLEKDGKTTEASLDHKPTDSSYNFEKHSDVFEFLRVEKDLLLKFLRDMDFSGKKLHQPSQTKARLTKCGSFPLASTSQMRNISSRSLKHKQNEIYPKGEFFFAGTQESNMSVSSVKKDVSYEKPLTLVSDLGVDSAMKQKAIISSKSSQESNHRGWNQLVLHQFKAIKQKIKHALVEFRKSSYQTSAEAIHHRASPEYSIINNDEEISRTLEDGVVQEYKRSKSSNETKASDYDSNKHDARLMRRTSSLNESLDRYTQLFEKSFSKEAKWQSSKSKSLKLTHEDKIHKSAHVPKFSRSNFSMPNLETLGFIVQEALFNTNDIGTEETYDRVHRKSVSLPLKMDKSLDNFKEAEIVETDKILEKIDEVTYDQKEDMDEPAVGDGCFTQEKEEMSNMTAYLSKEVTPTLETSSEDNITSHAEGTELYTRVSTLEELETDLSDKGSVWPDSSSNRNASVVTAEDTDYPSNFKYVKKVLEYSGFLGNEHTQMRYTIDQPLKPSLFKDLDESLSHEIEPSEEETMNPYDHQLIFNLVNEVLLEIYGRSPTYFPRPFSFNPRLHPMPKGRYLLNEVWSSVNSYMTLRPELDQTLDDVVGRDLAKGRGWMILQEEEEYVGLELEEMIMDDLLDEFMFS* 759
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g1485 758 PANTHER PROTEIN TRM32 1 758 - -
Pvu5g1485 758 MobiDBLite consensus disorder prediction 565 586 - -
Pvu5g1485 758 MobiDBLite consensus disorder prediction 569 586 - -
Pvu5g1485 758 Pfam Domain of unknown function (DUF4378) 595 754 IPR025486 -
Pvu5g1485 758 PANTHER PROTEIN TRM32 1 758 IPR044257 -
Pvu5g1485 758 MobiDBLite consensus disorder prediction 345 365 - -
Pvu5g1485 758 MobiDBLite consensus disorder prediction 81 123 - -
Pvu5g1485 758 MobiDBLite consensus disorder prediction 81 114 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g1485 Pvu-Chr5 37247621 37252412 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu5g1485 156 748 TRM (TON1 Recruiting Motif) Superfamily AT5G02390 27.948 8.27e-45 171
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g1485 - - gmx:100784103 1119.38
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g1485 5 37247621 37252412 Pvu5g1485 5 37247621 37252412 ECH