Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g1471 ATGATGGGTGTGTCGGGCGCCGATGACGACGTCGTTCAAATCCAGCATCCCAACAACCCCGGCGACCCTTTCATCCTCACCATCAATTGCCCCGACAAGACCGGCCTCGCTTGCGATATCTGCAGTATCATTCTCGATTTCGGTCTCTGCATTTTCAAAGGAGATGTTTCAACCGATGGCGTGTGGTGTTACATTGTGTTATGGGTTATTCCACACTCCCTGTTGCTTCCCATGAATTCATCTTATCTGATCCTCAAAGAACGACTTCAGGGGATTTGTCCGCCTTGTTTGGCCTCCTTTTATATCTTCCAGCAGCCTTCCAGATCTTCACCTGTCTATCTGTTGAAGTTCTGTTGCCTTGATCGAAAGGGATTGTTGCACGATGTAACAAAAGTGCTCTCGGAGCTTGAACTTACCATTCAAAAGGTGAAAGTGACCACAACCCCGGATGGTAGAGTGTTGGACCTCTTTTTCGTGACAGATAACAAGGAACTGTTACACACGAGAAAGCGACAAGATGAGACATGTGAAAGACTGAATGATATTCTTCGAGGCTCGTGTATCAGCTGTGAGCTTCAATTGGCGGGTCCAGAGTATGAACATAATCAGGGTATCTCTTCTCTGTCTCCTGCGTTAGCTGAGGAGTTATTTCGATGTGAGTTATCAGAAAATGAAGTTCGTTCTCAAGCTCTTAGCCCTGATATGGCAAAGTTGAAGAAAAGCAACGTAACACTAGACAATTCCTTAAGCCCAGCTCACACGCTAGTTCAAATACGATGTGCTGATCACAAGGGTCTTCTTTATGACATTATGAGAACATTGAAGGACATGAATATAAAGATTTCATACGGCCGATTTTCACCCAATTCCATGGGATATCGTGAGTTAGATATATTTATTCAGCAGAAAGAAGGAAAAAAGATTTTGGATGTGGAGAAGCAGAGTGCACTATGCTCTCGTTTGAAACTGGAAATGCTTCATCCATTGCGAGTAATCATTGCCAACCGAGGACCGGATACTGAACTGTTGGTCGCTAATCCTGTTGAGCTATCTGGAAAAGGAAGACCTCGAGTTTTCTATGATGTCACGTTTGCTCTCAAAACACTTGGAATTTGTGTTTTCTCGGCTGAAGTGGGAAGGCATTCAACATTAGAGCGTGAATGGGAGGTATACAGATTTCTCTTGGATGAGAATTGTGAGTTTCAATTAACAGGTGTTGCTGCAAGAAATAAGATTGTAAATAAGGTTAGAAGAACCTTAATGGGTTGGTAA 1272 0.4355 MMGVSGADDDVVQIQHPNNPGDPFILTINCPDKTGLACDICSIILDFGLCIFKGDVSTDGVWCYIVLWVIPHSLLLPMNSSYLILKERLQGICPPCLASFYIFQQPSRSSPVYLLKFCCLDRKGLLHDVTKVLSELELTIQKVKVTTTPDGRVLDLFFVTDNKELLHTRKRQDETCERLNDILRGSCISCELQLAGPEYEHNQGISSLSPALAEELFRCELSENEVRSQALSPDMAKLKKSNVTLDNSLSPAHTLVQIRCADHKGLLYDIMRTLKDMNIKISYGRFSPNSMGYRELDIFIQQKEGKKILDVEKQSALCSRLKLEMLHPLRVIIANRGPDTELLVANPVELSGKGRPRVFYDVTFALKTLGICVFSAEVGRHSTLEREWEVYRFLLDENCEFQLTGVAARNKIVNKVRRTLMGW* 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g1471 423 ProSiteProfiles ACT domain profile. 114 197 IPR002912 -
Pvu5g1471 423 PANTHER OS05G0113000 PROTEIN 8 423 - -
Pvu5g1471 423 SUPERFAMILY ACT-like 21 69 IPR045865 -
Pvu5g1471 423 PANTHER ACT DOMAIN-CONTAINING PROTEIN ACR4-RELATED 8 423 IPR040217 -
Pvu5g1471 423 Coils Coil 420 423 - -
Pvu5g1471 423 SUPERFAMILY ACT-like 111 180 IPR045865 -
Pvu5g1471 423 Pfam ACT domain 114 171 IPR002912 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g1471 Pvu-Chr5 37121165 37125086 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu5g1471 109 214 MAP Kinase Kinase Kinase AT4G35780 30.631 6.15e-06 46.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g1471 - - gmx:100793459 790.415