Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g1458 ATGCCGATTTCTAGAATTGCCGTTGGAAATTCTTCGGAGTTGAGCCAGGTGGACGCGCTTAAGGCTGCTCTTGCTGAGTTCATCTCAATGCTCAATTTTGTTTTTGCCGGACAAGGCTCTGGCATGGCTTTTAATAAACTCACAAACAATGGTTCAACAACACCAGCAGGTTTAGTGGCAGCGTCACTGTCACATGCATTTGCACTTTTTGTTGCTGTCTCAGTTGGTGCAAACATTTCTGGTGGTCATGTGAACCCTGCTGTCACTTTCGGTGCCTTTATTGCTCAGTTGCTTGGCTCTGTGGTTGCTTGCTTGCTCCTTAAATTTGCCACTGGTGGAATGGAAACATCTGCATTTGCACTTTCTTCTGGTGTTGGAGCAGGGAACGCTCTAGTGTTTGAGATTGTGATGACTTTTGGTTTGGTTTACACGGTGTACGCAACTGCAGTGGATCCAAAGAAGGGTGAGATCGGCATAATTGCTCCAATTGCAATTGGTTTCATAGTTGGTGCTAACATCTTAGCTGGTGGTGCATTTGATGGTGCATCCATGAACCCTGCTGTGTCTTTTGGGCCTGCTGTTGTGAGTTGGACTTGGGCTAACCATTGGGTTTATTGGGTCGGCCCATTCGCTGGTGCTGCCATTGCTGCTGTTGTCTACGAGATTTTGTTCATCAACCCAAACACTCATGAACAGCTCCCCACCACCGATTACTAG 717 0.47 MPISRIAVGNSSELSQVDALKAALAEFISMLNFVFAGQGSGMAFNKLTNNGSTTPAGLVAASLSHAFALFVAVSVGANISGGHVNPAVTFGAFIAQLLGSVVACLLLKFATGGMETSAFALSSGVGAGNALVFEIVMTFGLVYTVYATAVDPKKGEIGIIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVVSWTWANHWVYWVGPFAGAAIAAVVYEILFINPNTHEQLPTTDY* 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g1458 238 Gene3D Glycerol uptake facilitator protein. 4 238 IPR023271 -
Pvu5g1458 238 Pfam Major intrinsic protein 13 220 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pvu5g1458 238 PANTHER MAJOR INTRINSIC PROTEIN-RELATED 1 238 - -
Pvu5g1458 238 ProSitePatterns MIP family signature. 83 91 IPR022357 -
Pvu5g1458 238 PANTHER AQUAPORIN-8 1 238 IPR034294 -
Pvu5g1458 238 PRINTS Major intrinsic protein family signature 21 40 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pvu5g1458 238 PRINTS Major intrinsic protein family signature 65 89 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pvu5g1458 238 PRINTS Major intrinsic protein family signature 133 151 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pvu5g1458 238 PRINTS Major intrinsic protein family signature 166 188 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pvu5g1458 238 PRINTS Major intrinsic protein family signature 203 223 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pvu5g1458 238 SUPERFAMILY Aquaporin-like 15 230 IPR023271 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g1458 Pvu-Chr5 37002967 37004601 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu5g1458 1 238 Major Intrinsic Protein MIP AT4G01470 75.000 6.70e-130 365
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g1458 K09873 - gmx:547794 416.387
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g1458 5 37002967 37004601 Pvu11g0689 11 5823762 5825153 PCT