Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g1445 ATGACTTATTGGAGAAATATTGGTTTTTTTCTCTGTGTTTTATCAATCTTCCCCCTTGTATGTTTTTCTGCCACCTTTGTTCCAGTAGATAATTATCTCATAGACTGTGGAGCATCTGCAACTACTACAGTAGGCAGGCGCAATTTCACAGCAGATAGTTTGTCCAAGGATCTGCTTTCTACACAAGAAGATATTCTTGCCACTAATCCCTTAACATCAAGTTCTTCCTCTGATGATTCGCCTCTCTATCAAACTGCAAGAATCTTCCGTGGATCCTCAAAGTACACCTTTCCAATTAAGCAAAAGGGGAGACACTGGATCCGTCTATATTTCTTTCCATTTACTTATGAAAAGTACAATTTGAGTGCTGCAAATTTCACTGTTGCCACACAAGACCATGTTCTTTTCAGTAGCTCCAACATGCAGAAAGATCCTGTGATGAAGGAGTACTCTGTGAATGTGACCTCAGACAACCTTGTTATCACCTTTGCCCCTTCTGGCAATTCCACTGCCTTTGTGAATGCCATTGAAGTTGTTTCTGTCCCCGATGACCTCATTGTTAACGATTTTTCCGTCTTGGATCCATCGTTAAGCTTATCTGAGCTGGTGACGCAAGCACTGGAGACAGTTTGGAGGGTTAACATGGGTGGTCCAACTGTGACCCCTGTGAATGACACCCTTCAAAGAACTTGGATTCCAGATCAAAGGTTCCTTTTGGAAGCTGACCTTGCCACATATGTTTCTAATATTGGTGCTGTTCGGTATGAGAAAGGTGGTTCAACAACAGAAAACACCGCTCCCGCTACTGTTTATGGTACCCTCGCACAGATGAACTCAAGCTTTGATCCCCGAAGTAATTTTAATGTGACATGGAATTTTGATGTGAGTCCTGGATTTCAGTACCTTGTTCGATTTCACTTCTGTGATTTGATCAGTAAAAGTCTCAATGTACTCTACTTCGATGTTTATGTTGACTCCAAGATGGCTGCTGCTGATGTTGATCTCAGTCTTCATGGTAATAATGTTTTGGGTGTTCCATATCATAAGAATTTGGTCACACCGTTGGCTGTCAGCAATAAACTTCGTGTAAGTATTGGTCCTTCTGATTTAAGTAAGGATTTCCCTAATGCTATTTTGAATGGGCTTGAGATCATGAAAATGAACAATTCCATGGGCAGTCTTATCACAGGAGCAGGACCTGTGGCTATTAGTTCAGGTTCAAGTTCTAAGAGCATTGGCATGATTGTGGGTGTGATTGTTGGGGTAGTTGCTGCGGTTGTCTTGGCTGGAGTTTTCTTTGTATTATGCATGAGAAGACGAAAGTTGGCTCGGCAAAGGAAGTCAAAGACATGGGTTCCTTTATCCATCAATGATGGAACTACTTCTCATACCATGGGAAGTAAATATTCTAATGGCACAACACTAAGTGCTGCTTCAAACTATGAGTACCGCGTGCCTTTTCTTGCAGTTCAGGAGGCTACAAACAACTTTGATGAGAGTTGGGTTATTGGGATAGGTGGTTTTGGCAAAGTGTACAAAGGAGAGTTAAGTGATGGCACAAAAGTAGCAGTGAAGAGAGGGAATCCACGGTCCCAGCAGGGGCTTGCAGAATTCAGAACTGAAATTGAAATGCTGTCTCAGTTCCGCCATCGCCATCTGGTGTCTTTGATTGGTTATTGTGATGAAAGGAATGAAATGATCTTGATATATGAATATATGGAGAAAGGAACTCTCAAGAGTCATTTATATGGCTCAGGTCTGCCTAGCTTAAGCTGGAAGGAGAGGCTTGAGATATGCATTGGATCAGCCAGAGGACTTCATTATCTTCACACTGGCTATGCTAAAGCTGTTATTCACCGTGATGTGAAGTCTGCAAATATTCTACTTGATGAGAAACTAATGGCTAAAGTCGCTGATTTTGGACTATCAAAGGCAGGGCCTGAAATTGACCAGACACATGTGAGCACAGCTGTCAAAGGTAGTTTTGGGTACCTCGATCCAGAGTATTTCAGGAGGCAACAACTAACAGAAAAGTCAGATGTGTATTCATTTGGGGTAGTCCTGTTTGAAGTTCTTTGTGCAAGGCCTGTCATAGATCCAACACTTCCTAGGGAAATGGTAAACTTGGCAGAATGGGCAATGAAATGGCAGAAGAAAGGACAGTTGGAGCAAATCATAGATCAAACACTTGCAGGCAAAATCAGGCCAGATTCTCTTAGGAAGTTTGGAGAAACTGCTGAGAAATGCTTGGCTGACTATGGTGTTGACAGACCTTCTATGGGAGATGTCTTGTGGAATTTGGAGTATGCTCTCCAACTTCAAGAGGCTGTGGTTCAAGGTGATCCTGAAGAAAACAGCACTAATATGATTGGTGAACTCTCTCCACAGATCAACAATTTCAGCCAGGATGCAAGTGCTTCTAATGCACAATTCGAAGGCACGAGTCTGGATGATCTGTCTGGTGTTTCTATGAGTAGGGTCTTCTCACAATTGGTGAAGTCTGAGGGTAGATAG 2514 0.4244 MTYWRNIGFFLCVLSIFPLVCFSATFVPVDNYLIDCGASATTTVGRRNFTADSLSKDLLSTQEDILATNPLTSSSSSDDSPLYQTARIFRGSSKYTFPIKQKGRHWIRLYFFPFTYEKYNLSAANFTVATQDHVLFSSSNMQKDPVMKEYSVNVTSDNLVITFAPSGNSTAFVNAIEVVSVPDDLIVNDFSVLDPSLSLSELVTQALETVWRVNMGGPTVTPVNDTLQRTWIPDQRFLLEADLATYVSNIGAVRYEKGGSTTENTAPATVYGTLAQMNSSFDPRSNFNVTWNFDVSPGFQYLVRFHFCDLISKSLNVLYFDVYVDSKMAAADVDLSLHGNNVLGVPYHKNLVTPLAVSNKLRVSIGPSDLSKDFPNAILNGLEIMKMNNSMGSLITGAGPVAISSGSSSKSIGMIVGVIVGVVAAVVLAGVFFVLCMRRRKLARQRKSKTWVPLSINDGTTSHTMGSKYSNGTTLSAASNYEYRVPFLAVQEATNNFDESWVIGIGGFGKVYKGELSDGTKVAVKRGNPRSQQGLAEFRTEIEMLSQFRHRHLVSLIGYCDERNEMILIYEYMEKGTLKSHLYGSGLPSLSWKERLEICIGSARGLHYLHTGYAKAVIHRDVKSANILLDEKLMAKVADFGLSKAGPEIDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEVLCARPVIDPTLPREMVNLAEWAMKWQKKGQLEQIIDQTLAGKIRPDSLRKFGETAEKCLADYGVDRPSMGDVLWNLEYALQLQEAVVQGDPEENSTNMIGELSPQINNFSQDASASNAQFEGTSLDDLSGVSMSRVFSQLVKSEGR* 838
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g1445 837 ProSitePatterns Serine/Threonine protein kinases active-site signature. 617 629 IPR008271 GO:0004672|GO:0006468
Pvu5g1445 837 Gene3D Phosphorylase Kinase; domain 1 459 572 - -
Pvu5g1445 837 ProSitePatterns Protein kinases ATP-binding region signature. 503 525 IPR017441 GO:0005524
Pvu5g1445 837 ProSiteProfiles Protein kinase domain profile. 497 770 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu5g1445 837 Gene3D - 31 182 - -
Pvu5g1445 837 Gene3D - 205 389 - -
Pvu5g1445 837 Pfam Protein tyrosine and serine/threonine kinase 502 709 IPR001245 GO:0004672|GO:0006468
Pvu5g1445 837 Gene3D Transferase(Phosphotransferase) domain 1 573 790 - -
Pvu5g1445 837 SMART serkin_6 497 770 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu5g1445 837 CDD STKc_IRAK 503 768 - -
Pvu5g1445 837 PANTHER RECEPTOR-LIKE PROTEIN KINASE HERK 1 18 809 - -
Pvu5g1445 837 SUPERFAMILY Protein kinase-like (PK-like) 474 768 IPR011009 -
Pvu5g1445 837 Pfam Malectin-like domain 34 387 IPR024788 -
Pvu5g1445 837 PANTHER OS07G0166700 PROTEIN 18 809 IPR045272 GO:0004714|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g1445 Pvu-Chr5 36872155 36875782 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu5g1445 10 837 Receptor kinase-like Gene Family AT3G46290 65.749 0.0 1086
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Pvu5g1445 Malectin_like 2.6e-37 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g1445 - - gmx:100305416 1373.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g1445 5 36872155 36875782 Pvu11g0714 11 6076578 6080161 PCT