Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g1440 ATGTTTGAACACTCCACCACTGCATCACCTTCTTCTCTCTTCCCTCAACTCACTCACTTCGACACCCTCTCCCAACTCAACAACTTCGACACCAGTTACTGCTATTACAACAACAACAACAACAGTAGTAGTAACTGTAGCAGTGGCTATAGCAGTTATGGTGGGTCTCCCACTTCTGTGGCCACTCCCAACTTTATGCAGAGGAGTGTCAACAGTAATTCCTTCAACTACAACAACAATGGCACCCACCACCCTCTTTCTGCTCTCTTCGCCGAATTGCTCGACTCCCATGATGCTCCAGTTAGGAGAGTTTGCAGTACCGGTGATCTCCAGGGGATTAATGGAGGTCAACATAATCACCTCTCGGATAGTCCGTTATCAAGCGAAAGTAGTATGATCATAGAAGGTATGAACAGAGCCTGTAGATATAGCCCAGAGGAGAAGAAGGTGAGAATTGAGAGATACAGAAGCAAAAGGAACCAGAGGAATTTCAACAAGAAAATTAAGTATGCTTGCAGGAAAACATTGGCAGACAGCAGGCCACGCATCAGAGGAAGGTTTGCAAGGAATGATGAAATTGACAAGAACACTTCAATTCAGTGGAGCCAAACTGGTGGAGATGAAGAGGAAGAAGAAGATGAGAATTGGTTCACCATCTTAGATTCCTTAGTTGCTGCAAATTTTGGTCAGGAGTCTCAAGGAAGTTGTTCCTCCCATGGTGTATTCTATTAG 732 0.4467 MFEHSTTASPSSLFPQLTHFDTLSQLNNFDTSYCYYNNNNNSSSNCSSGYSSYGGSPTSVATPNFMQRSVNSNSFNYNNNGTHHPLSALFAELLDSHDAPVRRVCSTGDLQGINGGQHNHLSDSPLSSESSMIIEGMNRACRYSPEEKKVRIERYRSKRNQRNFNKKIKYACRKTLADSRPRIRGRFARNDEIDKNTSIQWSQTGGDEEEEEDENWFTILDSLVAANFGQESQGSCSSHGVFY* 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g1440 243 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 5 243 IPR045281 GO:0009909
Pvu5g1440 243 Pfam CCT motif 150 190 IPR010402 GO:0005515
Pvu5g1440 243 PANTHER CCT MOTIF PROTEIN 5 243 - -
Pvu5g1440 243 ProSiteProfiles CCT domain profile. 148 190 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g1440 Pvu-Chr5 36837529 36839813 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu5g1440 106 195 C2C2-CO-like Transcription Factor Family AT5G15850 34.444 2.21e-12 63.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Pvu5g1440 CCT 8.7e-18 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g1440 - - vun:114184224 370.163
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g1440 5 36837529 36839813 Pvu5g1440 5 36837529 36839813 ECH
Pvu5g1440 5 36837529 36839813 Pvu11g0716 11 6087810 6090381 PCT