Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g1423 ATGGAGCAGTTCATCGATAACTTACCTTCGATGGATCTGATGCGATCCGAGAAGATGACCTTCGTTCAGCTCATCATCCCCGTCGAGTCCGCACACCGCGCCATTTCCTATTTGGGCGAACTCGGCCTTCTCCAATTCCGCGACTTAAATGCTGATAAAAGTCCCTTCCAAAGAACATTTGTTAATCAGGTAAAACGATGTGCAGAAATGTCAAGAAAACTACGATTCTTCAAGGATCAAATCAGTAAAGCTGGCCTATTGTCTTCATCTCGTACTGTATTGGAACCAGATATTGACTTGGAGGATTTGGAGATGCAACTTGCTGAACATGAACATGAGCTGATTGAAATGAACTCTAATAGTGACAAACTCAGGCAATCATATAATGAACTCTTGGAATTCAAGATTGTATTACAACAGGCATGTGGCTTTCTTGTTTCAAGTCATAACCTTGCACTTTCAGATGAAAGAGAACTACAAGAGAATGTCTTTTCAAATGATGCCTATGTTGAGACAGCATCTTTGCTTGAACAGGAAATGAGGCCTCAATCATCAAATCCGTCTGGTTTAAGATTTATCAGTGGGATAATCTGTAAATCCAAGGTTCTTAGGTTTGAAAGAATGTTGTTTCGTGCTACAAGAGGCAATATGCTATTCAATCAGGCACCAGCTGATGAAGAAATCATGGATCCTGTTTCAACTGAGATGATTGAAAAAACAGTGTTCGTCGTGTTTTTCTCCGGGGAACAGGCAAGAACAAAGATTCTTAAAATTTGTGAGGCATTCAGTGCAAATTGTTATCCTGTTCCTGAAGATATTAGCAAGCAGAGGCAAATAACTAGAGAGGTTTCATCACGTCTTACTGACTTAGAGGCAACTTTGGAAGCTGGGATTAGGCACCGGAACAAGGCTCTTGCTTCTGTTGTAGACCATCTAGCAAAATGGATGAACATGGTAAGAAGAGAGAAGGCTGTGTACGATACACTGAACATGTTAAACTTTGATGTCACAAAAAAATGTCTTGTAGGAGAGGGCTGGTGCCCTCTGCTTGCCAAAACACAGATGCAGGAGGCACTGCAACGTGCAACTTTTGATAGCAATTCTCAAGTTGGCATAATCTTCCATCCACTGGAGGCAGTGGAATCACCACCTACATACTTTCGGACCAACACTTTCACAAATCCATATCAAGAAATTGTTGATGCATACGGTGTTGCAAGATACCAAGAAGCAAATCCTGCAGTTTACACAACTATTATATTCCCTTTCCTATTTGCTTTGATGTTTGGGGACTGGGGTCATGGAATTTGTCTGTTGCTAGGAGCATTGGTTCTTATAGCACGAGAAAACAAGCTCAGCACACAGAAACTTGGAAGCTTTATGGAGATGCTATTTGGTGGGCGCTATGTGCTTCTTCTAATGGCACTATTTTCAATCTATTGTGGCTTAATCTACAATGAATTCTTCTCTGTTCCTTTTCACATATTTGGCGCATCTGCATACAAATGCCGCGATAGTTCTTGCAGGGATGCACATACTATTGGCTTAGTCAAATACCAAGATCCATACCCATTTGGTGTGGATCCCAGCTGGCGTGGAAGTCGTTCAGAATTGCCTTTCCTGAATTCTTTGAAAATGAAGATGTCCATTCTGTTTGGTGTGGCACATATGAACTTAGGAATTATATTAAGTTATTTTAATGCTCGGTTCTTTGGAAGCTCATTGGATATAAGGTACCAGTTTGTGCCACAGATTATTTTCCTTAACAGTCTATTTGGGTATCTTTCCCTTCTCATTATTATTAAGTGGTGTACTGGATCTCAAGCAGACCTTTATCATGTAATGATATACATGTTTTTAAGCCCCACTGACAATCTTGGCGAGAATCAGTTGTTTTGGGGCCAAAAACCACTTCAAATTGTGTTATTGCTTTTGGCTGTAATTGCAGTTCCATGGATGCTCTTTCCAAAACCTTTTATACTGAAGAAGCTTCATACTGAGAGATTTCAAGGTCGTAATTATGGCTTACTGAACACTTCTGAGGTGGATATTGAGGCTGAGCCTGATTCTGCCAGACAACATCATCATGAGGAATTCAATTTCAGTGAAGTCTTTGTTCACCAAATGATCCACGCCATTGAATTTGTTCTAGGTTCTGTTTCTAATACAGCATCATATCTTCGTCTTTGGGCATTAAGTTTGGCTCACTCAGAACTTTCTACTGTTTTCTATGAGAAAGTCCTGCTTCTTGCTTGGGGATATGACAATCTTGTCATTCGGTTGGTGGGACTCACCGTATTTTCTTTTGCAACTGCCTTTATACTACTAATGATGGAGAGTCTTAGTGCTTTTCTTCATGCCCTGAGGCTTCACTGGGTAGAATTTCAAAATAAATTCTACCATGGAGATGGCTACAAGTTCCGGCCTTTTTCATTTGCCTCCTTAACAGAGGATGACGATTGA 2463 0.406 MEQFIDNLPSMDLMRSEKMTFVQLIIPVESAHRAISYLGELGLLQFRDLNADKSPFQRTFVNQVKRCAEMSRKLRFFKDQISKAGLLSSSRTVLEPDIDLEDLEMQLAEHEHELIEMNSNSDKLRQSYNELLEFKIVLQQACGFLVSSHNLALSDERELQENVFSNDAYVETASLLEQEMRPQSSNPSGLRFISGIICKSKVLRFERMLFRATRGNMLFNQAPADEEIMDPVSTEMIEKTVFVVFFSGEQARTKILKICEAFSANCYPVPEDISKQRQITREVSSRLTDLEATLEAGIRHRNKALASVVDHLAKWMNMVRREKAVYDTLNMLNFDVTKKCLVGEGWCPLLAKTQMQEALQRATFDSNSQVGIIFHPLEAVESPPTYFRTNTFTNPYQEIVDAYGVARYQEANPAVYTTIIFPFLFALMFGDWGHGICLLLGALVLIARENKLSTQKLGSFMEMLFGGRYVLLLMALFSIYCGLIYNEFFSVPFHIFGASAYKCRDSSCRDAHTIGLVKYQDPYPFGVDPSWRGSRSELPFLNSLKMKMSILFGVAHMNLGIILSYFNARFFGSSLDIRYQFVPQIIFLNSLFGYLSLLIIIKWCTGSQADLYHVMIYMFLSPTDNLGENQLFWGQKPLQIVLLLLAVIAVPWMLFPKPFILKKLHTERFQGRNYGLLNTSEVDIEAEPDSARQHHHEEFNFSEVFVHQMIHAIEFVLGSVSNTASYLRLWALSLAHSELSTVFYEKVLLLAWGYDNLVIRLVGLTVFSFATAFILLMMESLSAFLHALRLHWVEFQNKFYHGDGYKFRPFSFASLTEDDD* 821
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g1423 820 PIRSF ATP6V0A1 9 820 IPR026028 GO:0000220|GO:0046961
Pvu5g1423 820 PANTHER VACUOLAR PROTON ATPASE A1 5 820 - -
Pvu5g1423 820 Coils Coil 100 127 - -
Pvu5g1423 820 PANTHER VACUOLAR PROTON ATPASES 5 820 IPR002490 GO:0033179|GO:0046961|GO:1902600
Pvu5g1423 820 Pfam V-type ATPase 116kDa subunit family 37 812 IPR002490 GO:0033179|GO:0046961|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g1423 Pvu-Chr5 36629304 36640152 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu5g1423 1 813 Primary Pumps ATPases(2) AT2G28520 80.982 0.0 1372
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g1423 K02154 - gmx:100776037 1561.97
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g1423 5 36629304 36640152 Pvu5g1423 5 36629304 36640152 ECH
Pvu5g1423 5 36629304 36640152 Pvu11g0735 11 6398436 6409366 PCT