Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g1400 ATGTTTACAATGCGATTGCTATGGGGGCTAAGGCTGCCCCTACTCATACTGATTCAACTTTTATTTCCCAACAGATCAACCTACAAATTATACGCTGAGGCTTTGATCACTTTCAAAGGTTCGCTTGGAGGTCCACAGCAATTAGGATGCAGCATTGTGAAATATCCATGTCAAATGCAATGGCCTTGTCTTGACTGCTATAAACTAAAAGATCCAGGTGGAGTGACAGGAAAGATAGATGGGAATAATGACATTCCAACACTTACACCTCTTCCAGAACCGCGAGATAGAAAACCAGGTGGAAGAAGGAGTTCTGCCATAATTGGCAGCGCTATTGCTGCCTTAGTTGTCCTTGTAATTGTGGTTACTGTCTATATCTGCTTGATGCGTGTTAAAAAATCTATGAGGCAAACATCTGAGGTTGCTTCTTCTATGCCATCTCCCACTGTTGAGATGGGAAGAGTCAACACGCAGCATGTTACTGCTTTCTCTCCACAAAACACAAGGCAGTTAACAATTTTGGAACTGGAACAAGCTACACGAAATTTCAGTCATAATAATATCATTGGTGAAGGTGGATTTGGTGTTGTATACAAGGGCTTGCTTCAAGATGGTTCTATTGTGGCTATAAAAAGGCGTCTATTTGCTCTGACACCAGATTTCGTTGTCGAGGTGAAACAGATAGCTCATATTCACCACATCCATCTTGTCAAGCTCATAGGCTATTATGAAGATAACCATCAACAATTACTTGTATATGAATATCTCCCTAACAGCAATGTAGGGAGTCACCTATATGACAGTGAAGGTTTACCTGTTGGAAGGTTAAACTTGTGGCGAAGGTTGTCTATTGCTTTAGGCGCATCCAAAGGAGTGGAACATCTTCACAGTTTGGTTCCTCCTTTGGTTCACACAAACTTTAGAACTAGCAATGTTCTGTTAGATGAAAATTATACTGCCAAGGTTTCTGATTATGGATTCTGCAAATTGCAAGCACAAGTTGATCGGGCAGGCTCGTCTTCAAATGTAGACTGTTTTCTTGACCCAGAGTTGAACATTCCACAAAACTATTCGGAGAAGAGTGATGTATACAGTTTCGGGGTCTTCTTACTAGAGTTGATAAGTGGCAGTGAAGCACATAACAAAAACATGTTACACCCAGATGAAAATATAGTATTTCAGGCAAAAAATAGTGTTGACTTGGACAAATTTGTTGACATAACACTGGGATACCAAGAAAAGAATGGTGCTAGACAAATATTGATGTTGGCATTGCTATGTGTGGATGTTACTTTTAGAAGACCATCAATGGCGCAAATTGTGCTAGAGCTGGAGCGGATTCAAAGAGAAATTGCTCCCATGTATTCTCAATTCAACGATGAGATTGGTGCCGTGACTCTTGGGAGTGAGCTCTTTCAATAA 1422 0.4065 MFTMRLLWGLRLPLLILIQLLFPNRSTYKLYAEALITFKGSLGGPQQLGCSIVKYPCQMQWPCLDCYKLKDPGGVTGKIDGNNDIPTLTPLPEPRDRKPGGRRSSAIIGSAIAALVVLVIVVTVYICLMRVKKSMRQTSEVASSMPSPTVEMGRVNTQHVTAFSPQNTRQLTILELEQATRNFSHNNIIGEGGFGVVYKGLLQDGSIVAIKRRLFALTPDFVVEVKQIAHIHHIHLVKLIGYYEDNHQQLLVYEYLPNSNVGSHLYDSEGLPVGRLNLWRRLSIALGASKGVEHLHSLVPPLVHTNFRTSNVLLDENYTAKVSDYGFCKLQAQVDRAGSSSNVDCFLDPELNIPQNYSEKSDVYSFGVFLLELISGSEAHNKNMLHPDENIVFQAKNSVDLDKFVDITLGYQEKNGARQILMLALLCVDVTFRRPSMAQIVLELERIQREIAPMYSQFNDEIGAVTLGSELFQ* 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g1400 473 MobiDBLite consensus disorder prediction 80 102 - -
Pvu5g1400 473 Pfam Protein tyrosine and serine/threonine kinase 186 399 IPR001245 GO:0004672|GO:0006468
Pvu5g1400 473 ProSiteProfiles Protein kinase domain profile. 183 473 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu5g1400 473 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 75 471 - -
Pvu5g1400 473 PANTHER PROTEIN KINASE APK1A, CHLOROPLASTIC-LIKE 75 471 - -
Pvu5g1400 473 SUPERFAMILY Protein kinase-like (PK-like) 162 452 IPR011009 -
Pvu5g1400 473 ProSitePatterns Protein kinases ATP-binding region signature. 189 211 IPR017441 GO:0005524
Pvu5g1400 473 Gene3D Phosphorylase Kinase; domain 1 145 255 - -
Pvu5g1400 473 Gene3D Transferase(Phosphotransferase) domain 1 257 465 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g1400 Pvu-Chr5 36344433 36347835 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu5g1400 89 447 Receptor kinase-like Gene Family AT1G79620 33.244 5.74e-52 187
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXa Pvu5g1400 PK_Tyr_Ser-Thr 1.6e-30 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g1400 - - gmx:100815066 773.081