Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g1382 ATGAAGCCTCAATTCAATGTTGCTGTGGCTCTACTTATTAGCTTGCTCTGTATTCAGCATTCATTTTGTGATGAACCTTCTGATACTGGACCAAACAAGTGGAAATGTAGATGCTCTTCATTACAAGGGAAGCATATATACTCTCCTGCTAATTGTTCCAAGTCATGTGATTGCCATTCAGATGCTGAAGAGAGTGCATCCATATGGACATGCTTATGTGATTCGAATGGTTTTCCTGAAGTGTCAGCAGATGGCCATAACCTTAACTGTTTTAAAGCCTGCAATTGCACGTGGGGAACTGTCAGGATGCCACTAGGTTCAAAGAAGCAAATTTCGAGCAAGATTGTAGTAGTTATTCTATCAGTATGTCTTACATGCACAACTATTGCATTTCTTGCCTCAGTTGTATGTCAGGTCTGCCGAAGGGAGAGATGTCCTATTCAATCACCAATGATCTCATCAGATAAAGAAACAAGTTACAGTAGCACCACCAACTTAATTAGTCATAAAACTTCTTCGCCTGTTAGTCATATTACAGGATGCTTTCAGAAATCCTCTTTGTTGTTTGGTAGCCAAAGACAAACCTTTTATGGAAATATTATTCAATTTTCATTCGCTGAACTAGAAAATGCCACCGAAAAATTTTCAACTTCCAATCTAACTGGACTAGGTGGAAGTAGTTACGTATACCGTGGTCGGCTGAAAGATGGTAGTAATGTGGCAGTCAAGAGACTAAAAGATCAAACAGGGCCTGAGGCAGACTATGAGTTTCTAACAGAGATTGAGCTATTGTCTAGACTTCATCATTGTCATCTGGTGCCATTAGTGGGATACTGCTCAGAACTAAAAGGAAAAAATGTTCAAAGGTTGCTAGTGTTTGAATACATGACTAATGGAAATTTAAGGGATCGCTTAGATGGAGTTTTTGGAAAAAAAATGGACTGGTCAACTCGAGTTAGAATTGCATTAGGAGCAGCAAGGGGCTTGGAGTATCTTCATGAAGCAGCTGCTCCAAGAATTCTGCACAGAGATGTCAAATCAACAAACATTCTTCTGGACAAAAATTGGCAAGCAAAAATAACTGATCTTGGTATGGCTAAAAGTTTGAGAGCTGATGACCACCCCAGTCGTTCAGATTCTCCAGCAAGAATGCAGGGAACATTTGGCTATTTTGCACCTGAGTATGCAATTGTTGGGAGAGCCTCTCTTGAGTCTGATGTCTTCAGTTTTGGAGTGGTTCTTCTTGAGCTTATCAGTGGTCGGCAACCCATCCACAAATCTGCAGGCAAAGAACAAAGTCTCGTTATATGGGCAACTCCTCGCTTAAAGGATAGCAGGCGAGTAATAACAGAGTTGGCTGATCCACAGTTGAAAGGAAACTTTCCAGAAGAAGAGCTGCATATAATGGCATACTTAGCTAAGGAGTGCTTGCTGTTGGATCCTGACACTCGACCAACTATGACTGAAGTTGTTCAAATTCTTTCCAGTATCTCCCCAGACAGATCTAGAAGGAGAAGAAACATTCCAGTGAGCCGTTTTCAGGAACCGGAGGACTTGGAGAATCAAAGACAAGCTCCATCAAGTATATTTCCAACTTGTGATTTATTGCCATTAGGTGTTGACAACAATCTTAATGTTGGGAATGAAAATAAAGATGCACATGCAGTTTCAAGTGAGCATATGGAGAGTTTGATCCTCTTTAGTCCAAAGGGAGAGAGGTGGCATGCATCAGAGGAGGAAATGGTAGATTTAACTGAGCCTCGTTTCGAATCATTTTTCATGACAAACCCCAATTTCTCTTGA 1803 0.4082 MKPQFNVAVALLISLLCIQHSFCDEPSDTGPNKWKCRCSSLQGKHIYSPANCSKSCDCHSDAEESASIWTCLCDSNGFPEVSADGHNLNCFKACNCTWGTVRMPLGSKKQISSKIVVVILSVCLTCTTIAFLASVVCQVCRRERCPIQSPMISSDKETSYSSTTNLISHKTSSPVSHITGCFQKSSLLFGSQRQTFYGNIIQFSFAELENATEKFSTSNLTGLGGSSYVYRGRLKDGSNVAVKRLKDQTGPEADYEFLTEIELLSRLHHCHLVPLVGYCSELKGKNVQRLLVFEYMTNGNLRDRLDGVFGKKMDWSTRVRIALGAARGLEYLHEAAAPRILHRDVKSTNILLDKNWQAKITDLGMAKSLRADDHPSRSDSPARMQGTFGYFAPEYAIVGRASLESDVFSFGVVLLELISGRQPIHKSAGKEQSLVIWATPRLKDSRRVITELADPQLKGNFPEEELHIMAYLAKECLLLDPDTRPTMTEVVQILSSISPDRSRRRRNIPVSRFQEPEDLENQRQAPSSIFPTCDLLPLGVDNNLNVGNENKDAHAVSSEHMESLILFSPKGERWHASEEEMVDLTEPRFESFFMTNPNFS* 601
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g1382 600 SMART serkin_6 215 497 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu5g1382 600 MobiDBLite consensus disorder prediction 505 525 - -
Pvu5g1382 600 SUPERFAMILY Protein kinase-like (PK-like) 195 494 IPR011009 -
Pvu5g1382 600 ProSiteProfiles Protein kinase domain profile. 215 497 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu5g1382 600 PANTHER OS01G0253100 PROTEIN 2 594 IPR045271 GO:0004714|GO:0006468
Pvu5g1382 600 Pfam Protein kinase domain 219 492 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu5g1382 600 CDD STKc_IRAK 222 497 - -
Pvu5g1382 600 PANTHER RECEPTOR-LIKE SERINE/THREONINE-KINASE NCRK PROTEIN 2 594 - -
Pvu5g1382 600 Gene3D Transferase(Phosphotransferase) domain 1 296 513 - -
Pvu5g1382 600 Gene3D Phosphorylase Kinase; domain 1 188 295 - -
Pvu5g1382 600 MobiDBLite consensus disorder prediction 505 519 - -
Pvu5g1382 600 ProSitePatterns Serine/Threonine protein kinases active-site signature. 340 352 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g1382 Pvu-Chr5 36065879 36070796 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu5g1382 1 596 Receptor kinase-like Gene Family AT2G28250 52.554 0.0 581
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XVI Pvu5g1382 Pkinase 3.5e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g1382 - - gmx:100499641 1026.93
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g1382 5 36065879 36070796 Pvu11g0835 11 7607440 7613679 PCT