Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g1370 ATGTGCAAGACAAAGATGGCCACCAACGCGGCAAGTCCCACGCCCACCCCGCGAACACAACAAGGCCCAACCCAAAGCCCAAGACCATCCTCCCCAAGGCCCACTCTCAGGCCCACCACTTCTTTCTCCGACAAACCCTCCACTTCCTACGCCTCTACCGCCAGCGCTCCCTACACCGGCTCCACCGGCTACCGTCTCTCCTCCGACACCTCCACTGCCAGCCGCACCTCGCTCACCTCCCTCCGCGACACGCTCCCAGAAAACCCTAACATATACGATTTCTCGGAAATCTGCGCCGCCACCAACAACTTCCTCGCCAAGCGCCACTCCTCCTCCACCCCCTGCTGGCGCTGCACTCTCCGCGGAGCCGAAGTCATTGTCTTCCAGCGCAAGTTCAGCCGCAAACTCCAGACGAATCAGCTCCAGCAACTCCTCTCTGTCGTCTGCCGCAGCCACCACGTCAGCATCATCAAACTCCTCGGCGCCTCTGTCTCCGGCGACAACATCTACCTCGTCTACGACTTCGTCAACGGCGCCAGCCTCTCCGATTGTCTCCGCAACAAGAACAACGCGCGCTTCACTGTTCTCTCCACGTGGATGTCGCGAATGCAGGTCGCCGCGGATCTCGCGCACGGACTCGATTACATTCACAACAAAACCGGTTTGAACATCAATTTCGTCCACAACCGTATCAAATCCAGCGGTATCATCGTCACCGAACCTTCTTTCAACGCCAGGCTTTGCCATTTCGGCACCGCGCAGCTCTGCGGCGAAATCGACCTCCAAAGCGAGCAATTAGGCGAAATCTTTGAGATAGAGGAGAAATTTCCGCCGTCCCCGGCGAGATCCAGGCAATTCGAGGGCGTGCGGGGGTACATGGCGCCGGAATTTCAAGCCTCCGGCGTTGCGACTCAGAAGTCTGATATATACGCTTTCGGAGTGGTCATGTTGGAGCTCCTGTCCGGGGAGGAGCCACTGAAGTTTAAATTTGACGAGAAAACGCGCGAATTTCTTAGGACGTCGGTGATCGAGGCGGCGAGGGTCGCCGTGGACGGCGGCGATGGTAGCGTACAGGGAAAGCTGAGGATGTGGGTGGACCGGCGATTGAAAGACTCCTTTCCCTTGGACGTAGCTGAGAAACTGACACGTGTCGCACTGGAATGCGTGCACGTGGATCCAGATAAGCGACCAAACATGGGACTCGTAGCTGGAAAGATCTCGAAGTTTTATTTGAAGTCGAGGATTTGGTCGGACAGTATTAAGATTCCTGATATTACGGTTTCGTTGGCTCCTCGTTGA 1299 0.5674 MCKTKMATNAASPTPTPRTQQGPTQSPRPSSPRPTLRPTTSFSDKPSTSYASTASAPYTGSTGYRLSSDTSTASRTSLTSLRDTLPENPNIYDFSEICAATNNFLAKRHSSSTPCWRCTLRGAEVIVFQRKFSRKLQTNQLQQLLSVVCRSHHVSIIKLLGASVSGDNIYLVYDFVNGASLSDCLRNKNNARFTVLSTWMSRMQVAADLAHGLDYIHNKTGLNINFVHNRIKSSGIIVTEPSFNARLCHFGTAQLCGEIDLQSEQLGEIFEIEEKFPPSPARSRQFEGVRGYMAPEFQASGVATQKSDIYAFGVVMLELLSGEEPLKFKFDEKTREFLRTSVIEAARVAVDGGDGSVQGKLRMWVDRRLKDSFPLDVAEKLTRVALECVHVDPDKRPNMGLVAGKISKFYLKSRIWSDSIKIPDITVSLAPR* 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g1370 432 Gene3D Phosphorylase Kinase; domain 1 65 175 - -
Pvu5g1370 432 PANTHER OS09G0572100 PROTEIN 1 432 - -
Pvu5g1370 432 MobiDBLite consensus disorder prediction 1 26 - -
Pvu5g1370 432 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 1 432 - -
Pvu5g1370 432 MobiDBLite consensus disorder prediction 35 82 - -
Pvu5g1370 432 ProSiteProfiles Protein kinase domain profile. 64 410 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu5g1370 432 Pfam Protein kinase domain 134 399 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu5g1370 432 Gene3D Transferase(Phosphotransferase) domain 1 177 419 - -
Pvu5g1370 432 MobiDBLite consensus disorder prediction 1 82 - -
Pvu5g1370 432 SUPERFAMILY Protein kinase-like (PK-like) 111 400 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g1370 Pvu-Chr5 35864086 35865384 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu5g1370 87 420 Receptor kinase-like Gene Family AT1G51940 32.059 7.60e-41 152
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Pvu5g1370 Pkinase 1.3e-23 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g1370 - - gmx:100792694 679.478
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g1370 5 35864086 35865384 Pvu5g1370 5 35864086 35865384 ECH