Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g1369 ATGATCAACATCATGAATTCAATGGGCTCAGTGAATAACATTAGTGTAGAGAGGGAATATGAATCTTTTTCAGCCAAGGAAGGTCCCTCAATGGTGAAAAACAAGAGGCCTCCTTCCAGAGGCAGTAAGGGGGACCGCCACATCAAGGTGAATGGGAGAGACCGCCGAGTTCGTCTATCAGCAATCTGTGCTGCTCGTATCTTCCAACTCACCCGTGAGCTAGGCAAGAAGACAGATGGTGAGACCATCGAATGGCTCTTACACAAGGCTGAGCCAGCCATTATTGCCGCCACTGGCACTGGCATTGTGCCTTCCATCACCACCTCCGTCGACACTGCCGCCACCTTCATGGCCACCACCACCACCTTTCTGCCACTACACACAATTGCTGCTCAGGATGCCAACTTAGTCACCGTTGCTGCGGTTGCAAGGACAGAGCAGCCGATCCCCCCTTTCCATTTCGACTTTGAGTGGATGCAGCACTCCGATTTAGGATTTCGTGACAATTAA 510 0.5118 MINIMNSMGSVNNISVEREYESFSAKEGPSMVKNKRPPSRGSKGDRHIKVNGRDRRVRLSAICAARIFQLTRELGKKTDGETIEWLLHKAEPAIIAATGTGIVPSITTSVDTAATFMATTTTFLPLHTIAAQDANLVTVAAVARTEQPIPPFHFDFEWMQHSDLGFRDN* 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g1369 169 ProSiteProfiles TCP domain profile. 43 97 IPR017887 -
Pvu5g1369 169 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 29 123 IPR005333 GO:0003700
Pvu5g1369 169 PANTHER TRANSCRIPTION FACTOR TCP16-RELATED 29 123 - -
Pvu5g1369 169 Pfam TCP family transcription factor 42 109 IPR017887 -
Pvu5g1369 169 MobiDBLite consensus disorder prediction 25 47 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g1369 Pvu-Chr5 35860510 35861757 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu5g1369 29 111 TCP Transcription Factor Family AT1G69690 63.855 4.37e-33 118
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Pvu5g1369 TCP 1.4e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g1369 - - pvu:PHAVU_005G132500g 332.413
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g1369 5 35860510 35861757 Pvu11g0848 11 7809341 7809841 PCT