Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g1361 ATGAGGAAGAAGAAGAAGGTGAGTGAAAATAGGGCAGATGAAGAGAATCAATTGGTTCATACCCGTGCCCAGCATTCACAGATAGATGCACAGCCGCGTTATCAAAAACATAATCATCAAAGAACTGTCCTTTGGTCAATTGCCAAGTCATCAACAACAACCATCACCAACACAACACACTTTATTCCAAGTTACTATACTATTAACAACCAGCAAACACTTGTCAACATGGCCAAGCTCAGTGTAAGAAGCAGCAAGAGAAGTGTAAGTGGCATTGTGAAGTTCAAATTCGTGGAGAAGCTCCAGAAGAGACTCTTGCCAGGGAGAAGCAAAGAAGGGTCCGTTTCAAACTCAACGTGCTGCGTGCCAGAGGACGTGAAGGAAGGACACTTCGCTGTGATTGCTGAGGGTGGAGAGGAACAAAAGAGGTTCGTGCTGCCACTAAGTTGTTTATCCAACCCTACTTTTTTGAAGCTTTTGGAGCAAGCAGAAGAAGAGTACGGTTTTGATCATGAAGGTGCAGTCACCATTCCTTGCAGGCCTAGTGAGCTTGAGAGGATACTGGCTCACCAATGGCATCAAGAAGGAACTCAAACTTCTGGTCTAAGAAAACCTTATTCAAAATCCATGCTCTTTTAA 639 0.4397 MRKKKKVSENRADEENQLVHTRAQHSQIDAQPRYQKHNHQRTVLWSIAKSSTTTITNTTHFIPSYYTINNQQTLVNMAKLSVRSSKRSVSGIVKFKFVEKLQKRLLPGRSKEGSVSNSTCCVPEDVKEGHFAVIAEGGEEQKRFVLPLSCLSNPTFLKLLEQAEEEYGFDHEGAVTIPCRPSELERILAHQWHQEGTQTSGLRKPYSKSMLF* 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g1361 212 MobiDBLite consensus disorder prediction 1 35 - -
Pvu5g1361 212 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 98 197 IPR003676 GO:0009733
Pvu5g1361 212 MobiDBLite consensus disorder prediction 21 35 - -
Pvu5g1361 212 Coils Coil 4 24 - -
Pvu5g1361 212 Pfam Auxin responsive protein 103 189 IPR003676 GO:0009733
Pvu5g1361 212 PANTHER AUXIN-RESPONSIVE PROTEIN SAUR32-LIKE 98 197 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g1361 Pvu-Chr5 35741390 35744469 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu5g1361 101 179 Calmodulin-binding Proteins AT3G43120 48.780 7.53e-16 70.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g1361 - K14488 gmx:102668167 184.496
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g1361 5 35741390 35744469 Pvu5g1361 5 35741390 35744469 ECH
Pvu5g1361 5 35741390 35744469 Pvu11g0862 11 8017793 8018413 PCT