Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g1359 ATGGTGTCTGACGCAAGCAAGAAGAAGGCAGCACAGAAGAAGGCGGCGACGGCCGCCAAGAGAGGTGGCAAAGCGGCAGCTGCTTCTTCCAAAACGTCGTCCTCTGAGAAGCCTGCCGACAGGCTCGCCGACGGAATTGGGGAGATTCAGATTTCCGATCGAACCTGCACCGGCGTCCTCTGCTCTCATCCTCTTTCGAGGGATATTAGGATAGAATCTCTCTCAGTTACTTTCCATGGACATGATTTGATAGTTGATTCTGAATTGGAGCTAAATTATGGAAGACGTTATGGTTTGCTTGGATTAAATGGTTGTGGAAAATCTACCCTTCTTACGGCAATAGGTTGTCGAGAGCTACCTATTCCAGATCACATGGATATTTATCACCTTAGCAGAGAAATTGAAGCCTCTGACATGTCTGCATTGGAGGCTGTCATAAGCTGTGATGAGGAAAGGTTGAAATTGGAGAAAGAAGCCGAAGCTTTGGCAGCTCAGGATGATGGGGGTGGCGAAACTCTTGAACGTATTTATGAACGATTGGATGCCTTAGATGCATCAACAGCAGAAAAGCGTGCCGCTGAAATTTTATTTGGTCTTGGTTTCAACAAGCAGATGCAGGCAAAGAAGACCCGTGATTTTTCTGGTGGCTGGAGAATGAGGATAGCTTTAGCTCGAGCTCTATTTATGAACCCAACCATTCTTTTACTTGATGAACCAACCAATCACCTCGATTTGGAGGCTTGTGTGTGGCTAGAAGAGAATTTGAAAAAGTTTGACCGCATTCTGGTTGTGGTTTCACACTCCCAGGATTTCCTTAATGGTATCTGCACAAATATCATCCACATGCAAAACAAGAAGCTGAAGCTCTATACTGGTAATTATGATCAATATGTTCAGACACGTGCTGAGCTTGAAGAGAACCAGATGAAGCAGTACAAATGGGAGCAGGAGCAAATTGCCTCTATGAAGGAATATATAGCTCGATTTGGTCATGGATCAGCAAAACTTGCACGCCAAGCCCAGAGTAAAGAGAAAACTCTTGCAAAAATGGAGCGGGGTGGACTCACAGAGAAGGTGGTAAGAGACAGAATTTTGGTATTCCGCTTTGTTGATGTGGGAAAACTTCCCCCCCCTGTCCTCCAATTTGTTGAGGTGACATTTGGTTACACTCCTGATAATCTGATCTATAAGAACCTTGACTTTGGGGTTGATTTAGACTCTAGAATTGCTCTGGTTGGACCCAATGGAGCCGGGAAGAGTACGTTACTGAAGCTAATGACTGGCGATCTGGTACCTGTAGGCGGCATGGTTCGACGCCACAATCACCTTCGAATTGCACAATTTCACCAGCACTTGGCTGAAAAGTTAGACTTGGAATTATCTGCTCTCCAGTTTATGATAAAAGAGTACCCTGGAAATGAGGAGGAGAGGATGAGAGCAGCTATTGGTAAATTTGGACTGTCGGGTAAAGCGCAGGTGATGCCGATGAAGAATTTATCTGACGGGCAGAGGAGCCGCGTGATATTCGCATGGCTAGCTTATAGACAACCTCACTTGCTACTTCTGGATGAGCCAACCAACCATTTAGATATTGAAACAATTGACTCATTGGCTGAGGCATTGAATGAATGGGACGGTGGCATGGTGCTTGTTAGTCATGATTTTAGGCTCATAAATCAAGTGGCCCACGAGATATGGGTGTGCGCTGATCAAGCTGTGACCAGATGGGAAGGTGACATTATGGATTTTAAGGAACACTTAAGATCCAAGGCAGCTTTGTCTGACTGA 1788 0.4541 MVSDASKKKAAQKKAATAAKRGGKAAAASSKTSSSEKPADRLADGIGEIQISDRTCTGVLCSHPLSRDIRIESLSVTFHGHDLIVDSELELNYGRRYGLLGLNGCGKSTLLTAIGCRELPIPDHMDIYHLSREIEASDMSALEAVISCDEERLKLEKEAEALAAQDDGGGETLERIYERLDALDASTAEKRAAEILFGLGFNKQMQAKKTRDFSGGWRMRIALARALFMNPTILLLDEPTNHLDLEACVWLEENLKKFDRILVVVSHSQDFLNGICTNIIHMQNKKLKLYTGNYDQYVQTRAELEENQMKQYKWEQEQIASMKEYIARFGHGSAKLARQAQSKEKTLAKMERGGLTEKVVRDRILVFRFVDVGKLPPPVLQFVEVTFGYTPDNLIYKNLDFGVDLDSRIALVGPNGAGKSTLLKLMTGDLVPVGGMVRRHNHLRIAQFHQHLAEKLDLELSALQFMIKEYPGNEEERMRAAIGKFGLSGKAQVMPMKNLSDGQRSRVIFAWLAYRQPHLLLLDEPTNHLDIETIDSLAEALNEWDGGMVLVSHDFRLINQVAHEIWVCADQAVTRWEGDIMDFKEHLRSKAALSD* 596
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g1359 595 MobiDBLite consensus disorder prediction 1 40 - -
Pvu5g1359 595 PANTHER - 1 595 - -
Pvu5g1359 595 Pfam ABC transporter 87 241 IPR003439 GO:0005524
Pvu5g1359 595 Pfam ABC transporter 396 527 IPR003439 GO:0005524
Pvu5g1359 595 Gene3D - 69 333 IPR027417 -
Pvu5g1359 595 Gene3D - 363 594 IPR027417 -
Pvu5g1359 595 Coils Coil 287 307 - -
Pvu5g1359 595 SMART AAA_5 93 295 IPR003593 -
Pvu5g1359 595 SMART AAA_5 405 571 IPR003593 -
Pvu5g1359 595 CDD ABCF_EF-3 380 571 - -
Pvu5g1359 595 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 380 595 IPR003439 GO:0005524
Pvu5g1359 595 CDD ABCF_EF-3 69 286 - -
Pvu5g1359 595 ProSitePatterns ABC transporters family signature. 213 227 IPR017871 GO:0005524
Pvu5g1359 595 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 69 309 IPR003439 GO:0005524
Pvu5g1359 595 PANTHER ATP-BINDING TRANSPORT PROTEIN-RELATED 1 595 - -
Pvu5g1359 595 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 63 313 IPR027417 -
Pvu5g1359 595 Pfam ABC transporter 280 352 IPR032781 -
Pvu5g1359 595 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 364 574 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g1359 Pvu-Chr5 35725070 35729511 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu5g1359 200 267 Calmodulin-binding Proteins AT2G36910 41.429 9.33e-08 53.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g1359 K06185 - gmx:100785099 1072.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g1359 5 35725070 35729511 Pvu5g1359 5 35725070 35729511 ECH
Pvu5g1359 5 35725070 35729511 Pvu11g0863 11 8021682 8025179 PCT