Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g1330 ATGGCGTTATCTTGGCCACACGTGCTGCAGATTCGTTCTCAACCTTCTCTCGGACATGCTAACTTCGTCTTCTTCTCCGATCTCACTGAATCCCGCTCTGTGGAACTGTCGTACACTGGTTCCCTCACCCTGCTTCGTCGGTGCAAGATCTCCGCTCCATCTGCGGCGGCGCTGAAACCGGTGAAATGCCTCAGCAGATCCACGGAGGAGAAGCAGAGCGACGCCGAAACCGCTGTATCCGACTCCGAAGAAGTTTCCGATGAACCAGATGACCGGAACCGAACTTCCTTTCCGGCAAACGGTCGTGTTGGTTCGCAGAGGATTCTCACCACGTCTTCAGGCGATTCTCTTTCTCTCGGAGTTCGAGAACCGGTTTATGAAGTCGTTGAAGTGAAGTCTAACGGGAAAGTGTCAACTAGAAAAATCAATCGGAGACAATTGTTGAAGTCAAGTGGTCTTCGTCCTCGGGACATTCGAAGTGTGGATCCTTCATTGTTTATGACAAATTCAATGCCTTCTTTGCTGGTCCGGGAGTATGCTATACTTCTAAATTTGGGTTCTCTACGAGCAATAGCAATGCAAGATTGTGTACTGATATTTGACAATAATCGTATAGGTGGGAAAGCTTTTCTAGAGACATTGCTGCCTCGATTGAACCCCAAGAACAACAATGGAGGACCATCGATGCCATTTGAAATTGAGGTTGTTGAAGCAGCATTGCTTTCAAGAATACAGCGATTGGAGCAGAGATTGATGGACTTAGAACCTCGTGTACAAGCTCTTCTTGAGGCCTTGCCAAATAGGTTAACTGGTGACATATTGGAGCAGCTTCGTATTAGCAAACAAACTTTGGTTGAGTTAGGCTCTAAGGCAGGAGCTCTCAGACAGATGCTGCTTGACCTTCTGGAAGATCCCCATGAAATACGTCGTATATGCATCATGGGACGAAACTGCACACTTAATAAAGGAAACAATAATATGGAATGCTCGGTGCCTTTTGAAAAGAAGAATGCTGAGGAGGAGGAGGAGGAAATTGAAATGCTTTTGGAAAATTATCTTCAAAGATGTGAATCCTGTCATGGTCAAGCTGAAAGGCTTCTTGATTCTGCAAGGGAAATGGAAGATTCTATAGCTGTCAATTTGAGTTCACGAAGGCTTGAGGTTAGCAGAGTAGAACTCCTTCTGCAGGTTGGAACATTCTGTGTGGCAGTGGGTGCCCTTGTAGCAGGTATATTCGGCATGAACCTGAAGTCCTATCTTGAGGAACATGTGTTGGCATTTTGGCTGACAACAGCGGGGATAATTGTCGGTGGAATTATTGCTTTCTTTCTGATGTATTCCTACCTCAGGGCGAGAAAAATATTTTGA 1368 0.4583 MALSWPHVLQIRSQPSLGHANFVFFSDLTESRSVELSYTGSLTLLRRCKISAPSAAALKPVKCLSRSTEEKQSDAETAVSDSEEVSDEPDDRNRTSFPANGRVGSQRILTTSSGDSLSLGVREPVYEVVEVKSNGKVSTRKINRRQLLKSSGLRPRDIRSVDPSLFMTNSMPSLLVREYAILLNLGSLRAIAMQDCVLIFDNNRIGGKAFLETLLPRLNPKNNNGGPSMPFEIEVVEAALLSRIQRLEQRLMDLEPRVQALLEALPNRLTGDILEQLRISKQTLVELGSKAGALRQMLLDLLEDPHEIRRICIMGRNCTLNKGNNNMECSVPFEKKNAEEEEEEIEMLLENYLQRCESCHGQAERLLDSAREMEDSIAVNLSSRRLEVSRVELLLQVGTFCVAVGALVAGIFGMNLKSYLEEHVLAFWLTTAGIIVGGIIAFFLMYSYLRARKIF* 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g1330 455 Coils Coil 331 355 - -
Pvu5g1330 455 Coils Coil 244 264 - -
Pvu5g1330 455 Gene3D Magnesium transport protein CorA, transmembrane region 204 386 - -
Pvu5g1330 455 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 59 454 IPR039204 -
Pvu5g1330 455 PANTHER MG2+ TRANSPORTER PROTEIN, CORA-LIKE/ZINC TRANSPORT PROTEIN ZNTB-RELATED 59 454 - -
Pvu5g1330 455 Pfam CorA-like Mg2+ transporter protein 335 444 IPR002523 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Pvu5g1330 455 CDD Mrs2_Mfm1p-like 128 454 IPR039204 -
Pvu5g1330 455 MobiDBLite consensus disorder prediction 61 105 - -
Pvu5g1330 455 Gene3D - 121 202 - -
Pvu5g1330 455 MobiDBLite consensus disorder prediction 64 78 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu5g1330 119 455 MRS2 Gene Family AT5G22830 83.976 0.0 560
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g1330 K16075 - gmx:100808371 778.859
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g1330 5 35328545 35338151 Pvu5g1330 5 35328545 35338151 ECH