Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pvu5g1303 | ATGGAGGAACACGAGAATGGTGCCAACGCAAGCGAAGAAGAAGCGTTGATAGGCCCGGGCCCGGCCCCTCGGGCTCGGCGCAAGCGACCCCTTCAGTTCGAGCAAGCCTACCTCAATGCTTTACCCTCCGCCAACATGTACGAGAAAAGTTATATGCACCGTGACGTGGTTACGCATGTCGCTGTTTCAGCTGCGGATTTTTTCATCACTGGAAGTTCCGATGGGCATTTGAAGTTTTGGAAGAAAAAGCCTATTGGCATTGAGTTTGCCAAACACTTCAGATCTCATCTTGGTCCAATTGAAGGTCTAGCTGTTAGTATTGATGGTCTGCTTTGCTGCACAATATCAGATGACCGCTCTGTAAAAATATACGATGTAGTCAACTATGACATGATGGTCATGATTCGCTTGCCATATACTCCTGGTGCTGTTGATTGGGTTTACAAGCAAGGGGATGTTAAAGCTACGCTTGCTATTAGTGATAGGAACTCATCTTTTGTGCACATATATGATGCACGAGCTGGTTCAAATGATCCCATCATCTCCAAAGAGATACATATGGGTCCTATCAAAGTTATGAAGTACAATCCTGTATATGATTCTGTACTTTCGGCAGATGCAAAGGGGATAATTGAATACTGGAGTTCTGCAACACTTCAATTCCCAGAGAATGAGGTCAATTTTAAACTGAAAAGTAATACTGACCTCTTTGAAATTGCAAAATGCAAGACTTCTGTTTCAACTATTGAGGTAAGTCCAGATGGTAAACAGTTTTCCATTACATCACCTGATCGAAGGATACGTGTGTTTTGGTTCAGAACGGGTAAATTAAGGCGAGTTTATGATGAATCCCTGGAGGTTGCTCAAGACCTCCAAAGAAGTGATGCTCCATTATATCGGTTGGAAGCTATTGATTTTGGTCGAAGAATGGCTGTTGAGAAAGAAATAGAAAAGACAGAAAGTGCACCACTTCCAAATGCAGTCTTCGATGAAAGTTCCAATTTTCTTATATATGCAACCTTGCTTGGGATAAAAATTGTTAATCTGCACACCAATAAAGTTAGTCGAATACTTGGAAAGGTGGAGAATAATGATAGATTCTTAAGAATAGCTTTATATCAAGGTGATCGGAGTAGCAAAAGAGTAAGAAGGATCCCTTCGGCAGCTGCAAATGTCAATGAGAGCAAGGAGCCTTTGACAGATCCCACTCTTCTGTGTTGTGCCTTCAAAAAGCACAGAATATATTTATTCAGTCGTAGAGAGCCAGAGGAGCCTGAAGATGCAACTAAAGGAAGAGATGTGTTCAATGAAAAACCTCCTGCTGATGAACTTTTGGCAGTTTCAGATATTGGAAAGTCAGTTACAACGTCACTTCCTGAAAATGTGATTCTACACACCACAATGGGTGATATTCACATGAAATTATACCCAGAGGAATGTCCAAAAACTGTGGAGAATTTCACAACACACTGTCGAAATGGCTATTATGACAATCTTATTTTTCATAGGGTCATCAAAGGCTTCATGATACAAACAGGAGATCCTTTGGGAGATGGCACTGGTGGGCAATCTATTTGGGGGAGAGAATTTGAGGATGAATTTCATAAAAGCTTGAGGCATGATAGGCCGTTCACAGTATCAATGGCGAACGCAGGCCCAAATACAAATGGCTCTCAGTTCTTTATCACCACAGTGGCTACTCCATGGTTGGACAACAAACACACTGTATTTGGTAGAGTTGCAAAGGGAATGGATGTTGTTCAGGGCATTGAAAAAGTGAAGACAGACAAGACAGACAAGCCATATCAAGATGTTAAAATTCTAAATGTCACTGTACCAAAGTCTTGA | 1848 | 0.4161 | MEEHENGANASEEEALIGPGPAPRARRKRPLQFEQAYLNALPSANMYEKSYMHRDVVTHVAVSAADFFITGSSDGHLKFWKKKPIGIEFAKHFRSHLGPIEGLAVSIDGLLCCTISDDRSVKIYDVVNYDMMVMIRLPYTPGAVDWVYKQGDVKATLAISDRNSSFVHIYDARAGSNDPIISKEIHMGPIKVMKYNPVYDSVLSADAKGIIEYWSSATLQFPENEVNFKLKSNTDLFEIAKCKTSVSTIEVSPDGKQFSITSPDRRIRVFWFRTGKLRRVYDESLEVAQDLQRSDAPLYRLEAIDFGRRMAVEKEIEKTESAPLPNAVFDESSNFLIYATLLGIKIVNLHTNKVSRILGKVENNDRFLRIALYQGDRSSKRVRRIPSAAANVNESKEPLTDPTLLCCAFKKHRIYLFSRREPEEPEDATKGRDVFNEKPPADELLAVSDIGKSVTTSLPENVILHTTMGDIHMKLYPEECPKTVENFTTHCRNGYYDNLIFHRVIKGFMIQTGDPLGDGTGGQSIWGREFEDEFHKSLRHDRPFTVSMANAGPNTNGSQFFITTVATPWLDNKHTVFGRVAKGMDVVQGIEKVKTDKTDKPYQDVKILNVTVPKS* | 616 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pvu5g1303 | 615 | PANTHER | PEPTIDYL-PROLYL CIS-TRANS ISOMERASE-RELATED | 4 | 613 | IPR044666 | - | |
Pvu5g1303 | 615 | MobiDBLite | consensus disorder prediction | 1 | 25 | - | - | |
Pvu5g1303 | 615 | PRINTS | Cyclophilin peptidyl-prolyl cis-trans isomerase signature | 475 | 490 | IPR002130 | GO:0000413|GO:0003755 | |
Pvu5g1303 | 615 | PRINTS | Cyclophilin peptidyl-prolyl cis-trans isomerase signature | 501 | 513 | IPR002130 | GO:0000413|GO:0003755 | |
Pvu5g1303 | 615 | PRINTS | Cyclophilin peptidyl-prolyl cis-trans isomerase signature | 544 | 559 | IPR002130 | GO:0000413|GO:0003755 | |
Pvu5g1303 | 615 | PRINTS | Cyclophilin peptidyl-prolyl cis-trans isomerase signature | 559 | 571 | IPR002130 | GO:0000413|GO:0003755 | |
Pvu5g1303 | 615 | PRINTS | Cyclophilin peptidyl-prolyl cis-trans isomerase signature | 572 | 587 | IPR002130 | GO:0000413|GO:0003755 | |
Pvu5g1303 | 615 | PANTHER | PEPTIDYLPROLYL ISOMERASE DOMAIN AND WD REPEAT-CONTAINING PROTEIN 1 | 4 | 613 | - | - | |
Pvu5g1303 | 615 | SMART | WD40_4 | 44 | 81 | IPR001680 | GO:0005515 | |
Pvu5g1303 | 615 | SMART | WD40_4 | 232 | 271 | IPR001680 | GO:0005515 | |
Pvu5g1303 | 615 | SMART | WD40_4 | 176 | 215 | IPR001680 | GO:0005515 | |
Pvu5g1303 | 615 | SMART | WD40_4 | 86 | 125 | IPR001680 | GO:0005515 | |
Pvu5g1303 | 615 | SUPERFAMILY | WD40 repeat-like | 44 | 359 | IPR036322 | GO:0005515 | |
Pvu5g1303 | 615 | SUPERFAMILY | Cyclophilin-like | 460 | 612 | IPR029000 | - | |
Pvu5g1303 | 615 | Gene3D | - | 450 | 615 | IPR029000 | - | |
Pvu5g1303 | 615 | Pfam | Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD | 462 | 612 | IPR002130 | GO:0000413|GO:0003755 | |
Pvu5g1303 | 615 | Pfam | WD domain, G-beta repeat | 91 | 125 | IPR001680 | GO:0005515 | |
Pvu5g1303 | 615 | Pfam | WD domain, G-beta repeat | 57 | 81 | IPR001680 | GO:0005515 | |
Pvu5g1303 | 615 | Gene3D | - | 32 | 292 | IPR015943 | GO:0005515 | |
Pvu5g1303 | 615 | ProSitePatterns | Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. | 496 | 513 | IPR020892 | GO:0003755|GO:0006457 | |
Pvu5g1303 | 615 | CDD | cyclophilin_WD40 | 463 | 610 | - | - | |
Pvu5g1303 | 615 | ProSiteProfiles | Trp-Asp (WD) repeats profile. | 50 | 81 | IPR001680 | GO:0005515 | |
Pvu5g1303 | 615 | ProSiteProfiles | Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. | 458 | 612 | IPR002130 | GO:0000413|GO:0003755 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pvu5g1303 | Pvu-Chr5 | 35008600 | 35015152 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pvu5g1303 | 462 | 612 | U-box Gene Family | AT5G67530 | 46.358 | 7.75e-41 | 155 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pvu5g1303 | K12736 | - | gmx:100792207 | 1184.86 |