Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g1284 ATGAATTTCCAACAATCAGAGCAAGAGGTGCCATTGCAAGACACAGAAGCTGCATTTTCTCAACTGAACCAACAAAATTCAGTACTCTCACTCACCCTTGAGGAGGTGAGCGGCAAGAACGGAAAGAGCTTAGGATCAATGAGCATGGATGAATTCATAGCCAGCATTTGGAACGCAGAAGAAATCCCACCACTACCCGTCTATGAGGAAGCTGCAAAGAACAAAAGCGTTGCACCAGAACCCACCATTCCCCAGCCAGGCTCATTCTCTGTCCCTCCCCCAATTTGCAAGAAAACTGTTGATGAGGTTTGGTCTCAGATCCAAAAAAGCCAACCAAAGCAGCACAATGAGGCTGACAAGAATGAAACACTCGAAAAGCAACCCACATTTGGAGAAATAACTCTGGAGGAATTCCTAGTAAAAGCTGGGGTTGTACGAGAATCAACACTATTCACTACTATATTGCCTCAGAATAATTTTGGTAACATTCCAAGCAATGTACCATTTAATACAAGCTATATATTAATAGGAACTACTGGATCTAATGTTCCTAGTAATAGATTTGAACCACATCCAATGCTGCCACAGAATAACACCTTAGTTTTAAGGAATCTCCCCACTGCACCTGCTACTCATTCTCAAAACTTGGGAGAATCAAGTGGGAAAGGCAAAAAAAGGATCATTAGTGGTCCTCCTGAAGAGGTAATAGAGAGGAGGCAGCGCAGAATGCTGAAGAATCGAGAATCAGCAGCACGATCTCGAGCAAGAAGACAGGCTTATACTGTGGAGCTTGAAGCAGAGCTGAATCATCTGAAAGATGAAAATGAAAAGCTCAAAACAGTTCTGGCTGCTGATGAACTCAAGAGGAAAGAAGCT 876 0.4304 MNFQQSEQEVPLQDTEAAFSQLNQQNSVLSLTLEEVSGKNGKSLGSMSMDEFIASIWNAEEIPPLPVYEEAAKNKSVAPEPTIPQPGSFSVPPPICKKTVDEVWSQIQKSQPKQHNEADKNETLEKQPTFGEITLEEFLVKAGVVRESTLFTTILPQNNFGNIPSNVPFNTSYILIGTTGSNVPSNRFEPHPMLPQNNTLVLRNLPTAPATHSQNLGESSGKGKKRIISGPPEEVIERRQRRMLKNRESAARSRARRQAYTVELEAELNHLKDENEKLKTVLAADELKRKEA 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g1284 292 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 3 291 IPR043452 GO:0003700|GO:0045893
Pvu5g1284 292 Gene3D - 236 290 - -
Pvu5g1284 292 Coils Coil 261 288 - -
Pvu5g1284 292 MobiDBLite consensus disorder prediction 211 233 - -
Pvu5g1284 292 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 236 280 IPR004827 GO:0003700|GO:0006355
Pvu5g1284 292 SMART brlzneu 234 289 IPR004827 GO:0003700|GO:0006355
Pvu5g1284 292 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 241 256 IPR004827 GO:0003700|GO:0006355
Pvu5g1284 292 SUPERFAMILY Leucine zipper domain 238 282 IPR046347 GO:0003700|GO:0006355
Pvu5g1284 292 Pfam bZIP transcription factor 238 281 IPR004827 GO:0003700|GO:0006355
Pvu5g1284 292 PANTHER BZIP TRANSCRIPTION FACTOR 3 291 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g1284 Pvu-Chr5 34807360 34809069 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu5g1284 22 291 bZIP Transcription Factor Family AT3G44460 43.972 6.25e-53 174
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Pvu5g1284 bZIP_1 3.7e-11 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g1284 K14432 - gmx:100799576 326.635
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g1284 5 34807360 34809069 Pvu5g1284 5 34807360 34809069 ECH