Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g1228 ATGGATGTCGATTCCTCGATGGTGCCGGAGACCGATCACGATCCGGCTGTGCAGAACCACGCCGCCGCTGCTCAGCCGTCGGCTGAGACGGAAGGAGAGCAGCTAGAGGAGCCTCCGTCGTCTGGAGGCGGATCTCCGGCGCCTGCTGCGGCGCCGCAGAGTCCGTCGGGTGGACCGAGGCTGGCGCCAACTTATACTGTGGTGAATGCAATTTTGGAGAAGAAAGAGGACGGACCGGGGCCGAGGTGCGGCCACACATTGACGGCGGTGGCGGCGGTCGGAGAGGAGGGGACGTCGGGGTACATTGGCCCGAGGCTGATTTTGTTCGGCGGTGCCACTGCTCTTGAAGGAAATTCTGCCGCTTCAGGGACTCCTTCATCTGCTGGAAATGCGGGCATACGTTTAGCTGGTGCCACAGCTGATGTCCACTGTTATGATGTCTTGACTAATAAATGGTCTAGGTTAACTCCCTTTGGAGAACCTCCGACTCCAAGGGCAGCACATGTGGCGACTGCTGTGGGAACTATGGTGGTTATTCAGGGTGGCATTGGTCCTGCTGGTTTGTCAGCTGAGGACCTTCATGTTCTTGATCTAACTCAGCAATGGCCACGCTGGCATAGAGTGTCTGTTCAGGGCCCTGGACCCGGACCACGTTATGGACATGTAATGGCTTTGGTGGGGCAGAGGTATCTAATGGCAATTGGAGGCAATGATGGAAAGAGACCTTTGGCGGATGTATGGGCCTTGGACACAGCTGCCAAGCCTTATGAATGGCGCAAGTTAGAGCCAGAAGGAGAGGGTCCACCTCCATGCATGTACGCAACTGCAAGTGCACGCTCGGATGGACTTCTTCTGCTCTGTGGAGGGAGAGATGCCAATAGTGTTCCATTGGCAAGTGCATATGGACTTGCTAAACATAGAGATGGTCGTTGGGAATGGGCAATTGCCCCAGGTGTCTCACCATCATCAAGATACCAGCATGCAGCGGTATTTGTCAATGCAAGGCTCCATGTGTCTGGTGGGGCTCTTGGTGGAGGAAGGATGGTAGAAGACTCATCAAGTGTTGCAGTATTGGACACTGCTGCTGGTGTTTGGTGTGATACGAAATCTGTTGTTACCAGTCCAAGAACTGGTAGGTACAGTGCTGATGCAGCAGGAGGAGATGCTGCAGTAGAGTTGACTCGACGTTGTAGGCATGCAGCTGCTGCAGTTGGTGACTTAATTTTTATTTATGGTGGTTTACGTGGGGGAGTCTTGCTAGATGACCTACTTGTTGCTGAAGATCTTGCAGCTGCTGAAACAACCGCTGCTGCTTCACATGCTGCTGCTGCTGCAGCTGCATCTAATGTACAAGCTGGGCGCTTACCTGGACGATATGGATTTATTGATGATAGAACGAGGCAAGCAATTCCTGAGGCAGCTGCTGATGGCTCTGTTGTTTTGGGAAATCCAGTTGCACCCCCAATGAATGGTGACATTTATACAGATATCAGCACCGAAAATGCCATGCTTCAGGGACCTCGGCGAACTGCTAAAGGTGTGGAGTATCTGGTTGAAGCATCAGCTGCAGAAGCTGAAGCTATCAGTGCAGCACTGGCTGCTGCCAAGGCACGGCAGGAGAATGGAGAGGCTGAAGTGCCTGATAGAGACCGTGGGGCAGAGGCTACCCCAAGTGGGAAACAAACATCTTCCTTGATCAAGCCTGATTCTGCTGGTGCAAATAACGTTACCCCTGGTGGAGTTCGGCTGCATCACAGAGCTGTGGTTGTTGCTGCAGAGACTGGCGGTGCATTAGGTGGCATGGTTAGACAGCTTTCAATTGATCAATTTGAAAATGAAGGCAGGCGGGTTAGTTATGGGACTCCAGAAAGTGCAACTGCTGCCAGGAAGTTATTAGATCGGCAGATGTCTATCAACAGTGTACCTAAAAAGGTCATTGCACACCTCTTAAAGCCTCGTGGATGGAAACCACCAGTACGGCGACAGTTTTTTTTGGATTGTAATGAAATTGCTGATCTTTGTGACAGTGCTGAGCGGATATTTTCTGGTGAACCAAGTGTTTTACAACTTAGGGCACCAATTAAAATATTTGGTGATCTACATGGACAGTTTGGTGATCTCATGCGCCTTTTTGACGAGTATGGTGCACCATCAACTGCTGGTGACATTGCATATATCGATTATCTATTCCTAGGAGATTATGTTGATCGTGGACAGCACAGCTTGGAAACTATAACCCTTCTTCTTGCTTTAAAGGTTGAGTATCCCAACAACGTACATCTAATACGTGGAAATCATGAAGCTGCAGATATAAATGCACTCTTTGGTTTCCGAATTGAGTGCATAGAGAGGATGGGTGAGAGAGACGGAATTTGGACCTGGCATCGGATAAACAAGCTGTTTAATTGGCTTCCTCTAGCAGCCTTAATTGAGAAAAAAATTATTTGCATGCATGGTGGTATTGGTCGTTCAATAAATCATGTAGAGCAGATTGAAAACATTCAGCGTCCAATTCCAATGGAAGCGGGATCGATTGTGCTTATGGATCTATTGTGGTCTGATCCGACAGAGAATGACAGCGTGGAAGGACTGCGGCCAAATGCTAGAGGTCCTGGATTAGTTACTTTTGGGCCTGATCGGGTGATGGAATTTTGCAACAACAATGATCTTCAACTAATTGTTCGTGCACATGAATGTGTGATGGATGGGTTTGAGCGTTTTGCCCAGGGACATTTGATCACGCTTTTTTCAGCTACAAATTATTGTGGTACCGCAAATAATGCCGGGGCAATATTAGTTTTGGGTAGAGACCTTGTTGTGGTTCCTAAACTGATTCATCCATTACCACCAGCAATTTCCTCACCAGAAACGTCACCAGAACGTCATATTGAAGATACATGGATGCAGGAGTTGAATGCTAACAGGCCACCAACACCAACTAGGGGCCGCCCCCCAGTAACAAACGACCGAGGTTCGCTGGCTTGGATATAA 2991 0.4938 MDVDSSMVPETDHDPAVQNHAAAAQPSAETEGEQLEEPPSSGGGSPAPAAAPQSPSGGPRLAPTYTVVNAILEKKEDGPGPRCGHTLTAVAAVGEEGTSGYIGPRLILFGGATALEGNSAASGTPSSAGNAGIRLAGATADVHCYDVLTNKWSRLTPFGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQWPRWHRVSVQGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDANSVPLASAYGLAKHRDGRWEWAIAPGVSPSSRYQHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSADAAGGDAAVELTRRCRHAAAAVGDLIFIYGGLRGGVLLDDLLVAEDLAAAETTAAASHAAAAAAASNVQAGRLPGRYGFIDDRTRQAIPEAAADGSVVLGNPVAPPMNGDIYTDISTENAMLQGPRRTAKGVEYLVEASAAEAEAISAALAAAKARQENGEAEVPDRDRGAEATPSGKQTSSLIKPDSAGANNVTPGGVRLHHRAVVVAAETGGALGGMVRQLSIDQFENEGRRVSYGTPESATAARKLLDRQMSINSVPKKVIAHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSGEPSVLQLRAPIKIFGDLHGQFGDLMRLFDEYGAPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAADINALFGFRIECIERMGERDGIWTWHRINKLFNWLPLAALIEKKIICMHGGIGRSINHVEQIENIQRPIPMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDLVVVPKLIHPLPPAISSPETSPERHIEDTWMQELNANRPPTPTRGRPPVTNDRGSLAWI* 997
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g1228 996 PRINTS Serine/threonine phosphatase family signature 693 720 IPR006186 GO:0016787
Pvu5g1228 996 PRINTS Serine/threonine phosphatase family signature 728 755 IPR006186 GO:0016787
Pvu5g1228 996 PRINTS Serine/threonine phosphatase family signature 761 785 IPR006186 GO:0016787
Pvu5g1228 996 PRINTS Serine/threonine phosphatase family signature 799 825 IPR006186 GO:0016787
Pvu5g1228 996 PRINTS Serine/threonine phosphatase family signature 889 909 IPR006186 GO:0016787
Pvu5g1228 996 PRINTS Serine/threonine phosphatase family signature 911 927 IPR006186 GO:0016787
Pvu5g1228 996 MobiDBLite consensus disorder prediction 1 62 - -
Pvu5g1228 996 ProSitePatterns Serine/threonine specific protein phosphatases signature. 762 767 IPR006186 GO:0016787
Pvu5g1228 996 SMART pp2a_7 665 949 IPR006186 GO:0016787
Pvu5g1228 996 SUPERFAMILY Metallo-dependent phosphatases 650 956 IPR029052 -
Pvu5g1228 996 Pfam Galactose oxidase, central domain 217 270 - -
Pvu5g1228 996 Gene3D - 629 967 IPR029052 -
Pvu5g1228 996 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE BSL3 1 996 - -
Pvu5g1228 996 Gene3D - 203 448 IPR015915 GO:0005515
Pvu5g1228 996 MobiDBLite consensus disorder prediction 972 996 - -
Pvu5g1228 996 MobiDBLite consensus disorder prediction 541 555 - -
Pvu5g1228 996 Pfam Kelch motif 324 369 IPR011498 GO:0005515
Pvu5g1228 996 MobiDBLite consensus disorder prediction 539 579 - -
Pvu5g1228 996 PIRSF STPPP_BSU1 25 996 IPR012391 GO:0004721|GO:0009742
Pvu5g1228 996 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE 1 996 - -
Pvu5g1228 996 MobiDBLite consensus disorder prediction 556 571 - -
Pvu5g1228 996 SUPERFAMILY Kelch motif 137 426 IPR015915 GO:0005515
Pvu5g1228 996 Pfam Calcineurin-like phosphoesterase 693 900 IPR004843 GO:0016787
Pvu5g1228 996 Gene3D - 63 190 IPR015915 GO:0005515
Pvu5g1228 996 CDD MPP_Bsu1_C 645 947 IPR041758 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g1228 Pvu-Chr5 33984901 33996355 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu5g1228 657 892 Calmodulin-binding Proteins AT5G63870 29.412 4.25e-27 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g1228 - - gmx:100776048 1822.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g1228 5 33984901 33996355 Pvu11g1026 11 10726653 10746135 PCT