Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g1223 ATGGGTGTATCAGGGAAGTGGATTAAAGCATTGATTGGTCTAAAGAAATCAGAAAAGCCAGAGTCTTCCGTGAAGGATGGAAATAAGGTTGGCAAGTTTCATCATCAACAAAGGCAAGCTGTTGAATTTGATAATGGTAAACTTCTAAACGAATTGGATTGTGAAGCTACTCCACCTATTGGAGATGATAATGCCCATGCAAACCTTGATGCCCATTATTCGTCCTCTTCTCCACAACAAGCACCTGATGCTGCACATGATCAACAGATGAGGGAGGAATGGGCTGCAATACACATTCAAACAGCGTTTCGAGGGTTTCTGGCCAGAAGAGCATTACGGGCTTTGAAAGGTGTGGTAAGGCTCCAGGCCCTTGTAAGGGGCCATGCAGTGAGAAAACAAGCAGCAATAACACTCCGTTGTATGCAAGCTTTGGTGAGGGTTCAAGCTCGTGTTCGGGCAAGACGTGTTTGCATGGCATTAGAAACTCAAGCATCACAACAGAAACTTCAGCAAAACCTTGCAAATGAAGCTCGAGTTCGAGAAATAGAAGAAGGATGGTGTGATAGTGTAGGATCTGTTGAAGATATTCAGGCTAAGATATTGAAGAGACAGGAGGCCGCAGCAAAACGTGAGAGAGCCATGGCATATGCTCTATCTCATCAGTGGCAGGCAGGATCAAGACAACAGCCAGTTTCCTCTGGATTTGAACCAGACAAAAGTAGCTGGGGTTGGAATTGGTTGGAAAGATGGATGGCTGTGCGGCCTTGGGAGAACCGCTTTGTTGACATTAATGTGAAGGATGGGGTAACGGTGCATGAAAATGAAGCTAAGGATGGTAAAAGTGGAACTACACCTCAGTTGAGCTCTGCTAACAAGAAACCATTCTCCTCAAACACTCATCCAAACCCAGCAAATCATGGATCTGGTCCCACTATTTCTGATGAGTGTGATTCTTCACCTAGCAAGTCTGCTGGTTTGCTAGAATCATCAAAAACGCAATCTGTTAAGCTAACTTCTAAGGGAAATGTTGAAAATAATGCTGAAGAAGTTAACTCAAAACCTAGAATTGGGTCAAGATCTCACAGTAATCCAAAGGAGAGAACATCACAGGCAGATAAGCAGGCGAAAAAACGGTTATCTCTGCCTAACAATGGGGGTAGTGCAGGATCTCAAATAGTCAAACACCCTATTAGTACTACTAACGTGAAAGGGACGCTAAGCACACAAAAGTCTAGTAGGGATAAGCCGAAGCTCAATGGAAGAAGGGACATGAATACAAAATCAGATCCATAG 1293 0.4393 MGVSGKWIKALIGLKKSEKPESSVKDGNKVGKFHHQQRQAVEFDNGKLLNELDCEATPPIGDDNAHANLDAHYSSSSPQQAPDAAHDQQMREEWAAIHIQTAFRGFLARRALRALKGVVRLQALVRGHAVRKQAAITLRCMQALVRVQARVRARRVCMALETQASQQKLQQNLANEARVREIEEGWCDSVGSVEDIQAKILKRQEAAAKRERAMAYALSHQWQAGSRQQPVSSGFEPDKSSWGWNWLERWMAVRPWENRFVDINVKDGVTVHENEAKDGKSGTTPQLSSANKKPFSSNTHPNPANHGSGPTISDECDSSPSKSAGLLESSKTQSVKLTSKGNVENNAEEVNSKPRIGSRSHSNPKERTSQADKQAKKRLSLPNNGGSAGSQIVKHPISTTNVKGTLSTQKSSRDKPKLNGRRDMNTKSDP* 431
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g1223 430 ProSiteProfiles IQ motif profile. 116 143 IPR000048 GO:0005515
Pvu5g1223 430 MobiDBLite consensus disorder prediction 414 430 - -
Pvu5g1223 430 MobiDBLite consensus disorder prediction 359 374 - -
Pvu5g1223 430 PANTHER IQ-DOMAIN 5-RELATED 2 387 - -
Pvu5g1223 430 SMART iq_5 114 135 IPR000048 GO:0005515
Pvu5g1223 430 SMART iq_5 91 113 IPR000048 GO:0005515
Pvu5g1223 430 MobiDBLite consensus disorder prediction 69 84 - -
Pvu5g1223 430 Pfam IQ calmodulin-binding motif 94 113 IPR000048 GO:0005515
Pvu5g1223 430 Pfam IQ calmodulin-binding motif 116 133 IPR000048 GO:0005515
Pvu5g1223 430 MobiDBLite consensus disorder prediction 54 89 - -
Pvu5g1223 430 MobiDBLite consensus disorder prediction 280 358 - -
Pvu5g1223 430 PANTHER IQ-DOMAIN 5-RELATED 2 387 - -
Pvu5g1223 430 Gene3D - 88 134 - -
Pvu5g1223 430 MobiDBLite consensus disorder prediction 375 413 - -
Pvu5g1223 430 ProSiteProfiles IQ motif profile. 92 120 IPR000048 GO:0005515
Pvu5g1223 430 MobiDBLite consensus disorder prediction 273 430 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Pvu5g1223 Pvu-Chr5 33940058 33946543 Dispersed/Transposed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu5g1223 1 430 IQD Protein Family AT3G22190 54.691 2.80e-120 355
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g1223 - - gmx:100781346 670.233
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g1223 5 33940058 33946543 Pvu5g1223 5 33940058 33946543 ECH