Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g1221 ATGGATCCCTTCATCCACAGGCTCCGTCGCCACCTTCTCACATGGCTTCACCGATCTCGCTCCGGTTCAGTGCTTTTTGTTCGGAGAGTTTCGTATAAAGATGTTCGAAGAGCAACGGATGGCTTCCTCAGAGTTATTTATAGCAATTCCAATGTTTCTGCGTATGCTGCCAGGTTTGAAGAGAGTGGCAGCGTTTGTTTGGTGAGAGAAGTGAAAGGCTTCGATGAAGGAAGCGATCATTTCTACAGACACGTGCAGTTCTTGGGACGCTTGCGACATCGCCACCTTCTCTCGCTTAAGGGTTTTTCCGTCGGGCGTAATCGCAAGAGATTGCTCATATTTGACAACATAGAAAATGGAAGCTTGAAGGATCATCTAAATGACCCTTTGAAGACTCCCTTAAATTGGAGAACGAGGTTACAGATAGCCAATGGCGTTGTGGCTGCACTGGAATATTTGTTTCTCTTCAGTGAACCACCTGTATGTCATGTCTCTATCACCTCAAGCAATATTATGTTAGATGAGAACTTCACAGCCAAACTATCTGATTTTGGCCTTCTTCCATCCGGTGGAAATTCTATTATGTTGCCATATTCAGAAGATTGCTTGAAGCAGAAAAGTTGTAGGATTATATTTCAACTTGGAGTGCTAATACTGGAACTGGTCACGGGTCAGTCTTCAGAGATGGAAGGTTCCGATTTAATTGAATGGATCCAAGAATCACGATTTTACAATTCCATTGATAAGATGATAGACCCTGATCTTGGTAACAATTATGACTGTACGGAGCTTAAAAGTCTTCTCGCTGTGGCAAAACTATGTATCAAATCATGGGACAAGCCCTCATTTACAATTCCTCAGTTATTCCGGCATCTCCAAAAGAAGATTGATATTACTCACGAATAG 906 0.4272 MDPFIHRLRRHLLTWLHRSRSGSVLFVRRVSYKDVRRATDGFLRVIYSNSNVSAYAARFEESGSVCLVREVKGFDEGSDHFYRHVQFLGRLRHRHLLSLKGFSVGRNRKRLLIFDNIENGSLKDHLNDPLKTPLNWRTRLQIANGVVAALEYLFLFSEPPVCHVSITSSNIMLDENFTAKLSDFGLLPSGGNSIMLPYSEDCLKQKSCRIIFQLGVLILELVTGQSSEMEGSDLIEWIQESRFYNSIDKMIDPDLGNNYDCTELKSLLAVAKLCIKSWDKPSFTIPQLFRHLQKKIDITHE* 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g1221 301 SUPERFAMILY Protein kinase-like (PK-like) 23 268 IPR011009 -
Pvu5g1221 301 Gene3D Phosphorylase Kinase; domain 1 13 115 - -
Pvu5g1221 301 ProSiteProfiles Protein kinase domain profile. 32 301 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu5g1221 301 Pfam Protein tyrosine and serine/threonine kinase 77 187 IPR001245 GO:0004672|GO:0006468
Pvu5g1221 301 PANTHER OS01G0253100 PROTEIN 1 297 IPR045271 GO:0004714|GO:0006468
Pvu5g1221 301 Gene3D Transferase(Phosphotransferase) domain 1 211 300 - -
Pvu5g1221 301 Gene3D Transferase(Phosphotransferase) domain 1 117 195 - -
Pvu5g1221 301 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 1 297 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g1221 Pvu-Chr5 33924179 33927717 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu5g1221 22 300 Receptor kinase-like Gene Family AT3G19300 36.964 4.95e-52 179
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_URK-1 Pvu5g1221 PK_Tyr_Ser-Thr 8.8e-15 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g1221 - - gmx:100791979 531.561