Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pvu5g1215 | ATGGAGGGTGCTGGGATGGAGGGGAATGATATCAATGATGACGGTAATAAGTCTGAGGCGCATTTGACTTCCGCCGCTGCTTTTGTTGAGGGTGGAATTCAGGATGCTTGTGATGATGCTTGTAGCATATGCCTCGAAGCCTTCTGTGACAGTGATCCTTCCACGGTTACCAGTTGCAAGCATGAGTTTCATCTTCAGTGCATTCTCGAATGGTGTCAAAGAAGCTCCCAGTGCCCCATGTGTTGGCAACCTATCAGTCTCAAAGATCCAACAAGCCAAGAATTACTTGAGGCAGTGGAAAGAGAGCGAAACTTTAGGATCAATCCACCTAGAAATGCCACAATATTTCATCATCCAACACTGGGGGATTTTGAGTTACAACATTTGCCAGTTGGAGCTAGTGATGCTGATCTTGAAGAGCGTATAATCCAACACTTGGCTGCTGCAGCAGCAATGGGAAGAGCACGCCACATTGCTAGAAGGGAAGGTCAGAGAAACAGGTCATCAGCTCAAGGTCGCCCACACTTTTTAGTTTTTTCGACTCATCCTAATTCACCTCCCATGGCTCCTACTTCTTCCTCTCCATCTCAGAGGGGAGATGATGAACCAACTCCTACAATTGCTGTTTCCAATCTGTCTCCAACTCCTGCAACGGGAGACCAATCATCACAAGTGACTTTAGTTGCTCCTGTTCAAGCAGACCAGGTTTCTGCTCTTGGTACAGATCATCAGGGATCATCTTACAGCAATAGGAGATCTCCTAATCAGTCATCTCCAAGTAGTCAAGACAGAGCAGGGCCATCAGAATTCCAGTCATTTTCAGAGTCTCTGAAATCGAAACTGAATGCTGTGTCAACAAGATACAAGGAGTCAATTTCCAAGAGTACAAAAGGGTGGAAGGAGAGATGGTTTTCTCGTAACAATGCTATGTCTGATATTGGATCTGATGTTAGGCGAGAAGTTAATGCAGGGATTGCAACTGTGTCGCGCATGATGGAACGTCTGGAGACCAGAGACAGTATTAGAAGCAATAGTAATTCAGCTCCAAGTAATTTAGAGGATGGTTCAGTTCAAGCACCTAATGATCAACCTTTAGCTGGCACTGAAGGGGGCAGTCTTTTGGGAGACAATAACACAAAAGCTTCTTGTGCTGCAGGTTCTAGTTCGAATTAA | 1173 | 0.4535 | MEGAGMEGNDINDDGNKSEAHLTSAAAFVEGGIQDACDDACSICLEAFCDSDPSTVTSCKHEFHLQCILEWCQRSSQCPMCWQPISLKDPTSQELLEAVERERNFRINPPRNATIFHHPTLGDFELQHLPVGASDADLEERIIQHLAAAAAMGRARHIARREGQRNRSSAQGRPHFLVFSTHPNSPPMAPTSSSPSQRGDDEPTPTIAVSNLSPTPATGDQSSQVTLVAPVQADQVSALGTDHQGSSYSNRRSPNQSSPSSQDRAGPSEFQSFSESLKSKLNAVSTRYKESISKSTKGWKERWFSRNNAMSDIGSDVRREVNAGIATVSRMMERLETRDSIRSNSNSAPSNLEDGSVQAPNDQPLAGTEGGSLLGDNNTKASCAAGSSSN* | 391 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pvu5g1215 | 390 | SUPERFAMILY | RING/U-box | 34 | 89 | - | - | |
Pvu5g1215 | 390 | MobiDBLite | consensus disorder prediction | 157 | 223 | - | - | |
Pvu5g1215 | 390 | MobiDBLite | consensus disorder prediction | 372 | 390 | - | - | |
Pvu5g1215 | 390 | MobiDBLite | consensus disorder prediction | 336 | 390 | - | - | |
Pvu5g1215 | 390 | Pfam | Ring finger domain | 40 | 81 | IPR001841 | - | |
Pvu5g1215 | 390 | PANTHER | E3 UBIQUITIN-PROTEIN LIGASE RHF2A | 10 | 390 | - | - | |
Pvu5g1215 | 390 | ProSiteProfiles | Zinc finger RING-type profile. | 41 | 81 | IPR001841 | - | |
Pvu5g1215 | 390 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 22 | 90 | IPR013083 | - | |
Pvu5g1215 | 390 | MobiDBLite | consensus disorder prediction | 184 | 223 | - | - | |
Pvu5g1215 | 390 | MobiDBLite | consensus disorder prediction | 240 | 274 | - | - | |
Pvu5g1215 | 390 | SMART | ring_2 | 41 | 81 | IPR001841 | - | |
Pvu5g1215 | 390 | PANTHER | ZINC FINGER, RING/FYVE/PHD-TYPE | 10 | 390 | - | - | |
Pvu5g1215 | 390 | MobiDBLite | consensus disorder prediction | 341 | 365 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pvu5g1215 | Pvu-Chr5 | 33818636 | 33822931 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pvu5g1215 | 38 | 89 | C3H Transcription Factor Family | AT5G15790 | 42.308 | 4.95e-11 | 60.5 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pvu5g1215 | K19043 | - | gmx:100814908 | 681.019 |