LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pvu5g1209	ATGTCATTGCCACCGCCATCTCTCGCAAAGGCGGCAATTGCGACGGAGCTCCCGATCCGGCAGATTCCAGGAAGTTATGGGTTACCGTTGCTTGGCCCCTTGTCGGATCGACTGGACTACTTCTGGTTCCAGAAGCCGGAGAGCTTCTTCAAGAAGCGAATGGAGAAGTACAAGAGCACGGTGTTCCGCACCAATGTTCCTCCCTCCTTCCCCTTCTTCACCAACGTTAATCCCAACGTCATCGCAGTTCTCGATGTCAAATCCTTCTCCCACCTCTTCGACCTGGACCTCGTCGACAAGAAGGACGTTCTCATCGGAGACTTTGTCCCCGACGTCAACTTCACCGGAAAAATCAGGGTCGGCGTGTACCAGGACACCTCCGAACCTCAACATTCCAAGGTGAAGAGCTACCTAATGGATATCCTGAAACGAAGCTCGAGCATATGGGTATCTGAACTAGTGTCCAATCTTGACATACTGTGGGACAACATCGAATCAACACTCTCAAATTCTTCATCTGTCTCCTATTTCTCCCCTTTACAACAATTTCTCTTCACTTTCCTCTGCAAAGTTCTCGCAGGTGCAGACCCATCTCGTGACCCCAAAATCGCAGACTCAGGCTCTGCCATGCTCAACCGATGGCTTGCCCTTCAGCTCCTCCCCACTGTCAGCATCGGCATACTCCAACCTCTCGAAGAAATCTTCCTCCATTCCTTCGCTTACCCTTTCTTTCTCGTTAGCGGAGACTACAACAACCTCTATAACTTCGTCAAGCAACAAGGGAAGGATACCATAAACAGAGGCGAAGTCGGGTTCGGGTTGACCCAAGAAGAAGCAATCCACAACTTGCTCTTCGTGCTAGGGTTCAACTCCTACGGGGGCTTCTCCATTTTCCTTCCAAGTTTGATTGATGCCATAGCGAGTAACTCCGCGTTGCAGGAGAAGCTGAAGAAGGAAGCCAGGGAAAACGGCGGCTCAACGCTCACCTTTGACTCCGTCAAAGAGATGCCACTCGTCCAATCGGTGGTCTACGAAACGCTGCGTATGAACCCTCCGGTTCCGCTGCAGTTCGGCCGCGCCCGAAAGGACTTCCGTTTGACCTCTCACGACTCCGTTTACGATGTGAAGAAGGGGGAGTTGCTATGCGGCTTCCAGAAGCTCGTGATGAGAGACTCTCTCATCTTCGACGAACCGGACCGCTTCAAGCCGGACCGGTTCACGGAGGAAAAAGGGGCCCAGTTGCTGGACTACTTGTACTGGTCCAATGGGCCTCAAAGTGGGTCCCCCACTCTCTCCAATAAACAGTGCGCGGGGAAAGACGTCGTCACCCTCACTGCGTCCTTGATTGTGGCTTACCTGTTTCGCAGGTATGATTCCATCAACGGCGATGGCAGTTCCATCACCGCCCTTCAAAAGGCTAGCTGA	1425	0.5249	MSLPPPSLAKAAIATELPIRQIPGSYGLPLLGPLSDRLDYFWFQKPESFFKKRMEKYKSTVFRTNVPPSFPFFTNVNPNVIAVLDVKSFSHLFDLDLVDKKDVLIGDFVPDVNFTGKIRVGVYQDTSEPQHSKVKSYLMDILKRSSSIWVSELVSNLDILWDNIESTLSNSSSVSYFSPLQQFLFTFLCKVLAGADPSRDPKIADSGSAMLNRWLALQLLPTVSIGILQPLEEIFLHSFAYPFFLVSGDYNNLYNFVKQQGKDTINRGEVGFGLTQEEAIHNLLFVLGFNSYGGFSIFLPSLIDAIASNSALQEKLKKEARENGGSTLTFDSVKEMPLVQSVVYETLRMNPPVPLQFGRARKDFRLTSHDSVYDVKKGELLCGFQKLVMRDSLIFDEPDRFKPDRFTEEKGAQLLDYLYWSNGPQSGSPTLSNKQCAGKDVVTLTASLIVAYLFRRYDSINGDGSSITALQKAS*	475

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pvu5g1209	474	Pfam	Cytochrome P450	305	458	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Pvu5g1209	474	PANTHER	INACTIVE LINOLENATE HYDROPEROXIDE LYASE-RELATED	10	470	-	-
	Pvu5g1209	474	SUPERFAMILY	Cytochrome P450	18	461	IPR036396	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Pvu5g1209	474	PRINTS	E-class P450 group IV signature	336	352	IPR002403	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Pvu5g1209	474	PRINTS	E-class P450 group IV signature	373	387	IPR002403	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Pvu5g1209	474	PRINTS	E-class P450 group IV signature	389	407	IPR002403	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Pvu5g1209	474	PANTHER	CYTOCHROME P450 26	10	470	-	-
	Pvu5g1209	474	Gene3D	Cytochrome P450	17	472	IPR036396	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pvu5g1209	Pvu-Chr5	33740948	33746722	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pvu5g1209	95	473	Cytochrome P450	AT4G15440	59.791	9.11e-173	489

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pvu5g1209	K10528		-	gmx:100784395	838.565

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Pvu5g1209	5	33740948	33746722	Pvu5g1209	5	33740948	33746722	ECH