Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g1166 ATGCTCCGACATGAGCAGAATGGAGAAAATGTGGGGAATGAAGGAGAACACGAAAAATGTGGGGAGCATAATGGAACATGTGCCAATTCTATAATGAGCCCTTTATTTCGATTCTGTTTTAACCACGAAAATTACACTGATTCTAGCCCTTATGCTACCAATTTAAACCAGTTGTTTGATCTGTTACACACCAAAGTATCCCTTAATGGCTTTGCACTTGATTCCATTGGCCAAGGCATGGACAAAGTGAATGGTCTAGCTTTGTGTCGTGGTGATGTCAACGCCACAAACTGCATGTCTTGTGTCGATGATGCAACCAAAAAGCTTCAAGAACGGTGCCCAAAGAAGAAGGGAGCAATAGTTTGGTACGATTACTGTCTTCTTAAGTACTCTAATGAATACTTCTTTGGTGAAAGTGATGAGAAGAACAAGTTTTATATGGTTAACATCTACGACGTAGATGACCCTGCTACTTTCAATGCTAAAGTCAATGAGTTGCTGAGTGCTTTGTCTTACAATGCTTCTCAAACTCCCATGTTATATGCCGTAGGGGAATTGCAACTTGAAGAAGCAAAAACACTGTACGGTTTGGCTCAGTGCACAAGGGATCTCTTTGGCCCTAGTTGTAAGAAGTGCCTTGATGAAGCTATTAGTGAACTTCCAGATTTTTGTGACGGAAAGGAAGGTGGAAGGGTTGTGGGTGGGAGCTGCTATGTTAGATATGAACTATACCCTATTGTTGAGGCCTAG 750 0.4173 MLRHEQNGENVGNEGEHEKCGEHNGTCANSIMSPLFRFCFNHENYTDSSPYATNLNQLFDLLHTKVSLNGFALDSIGQGMDKVNGLALCRGDVNATNCMSCVDDATKKLQERCPKKKGAIVWYDYCLLKYSNEYFFGESDEKNKFYMVNIYDVDDPATFNAKVNELLSALSYNASQTPMLYAVGELQLEEAKTLYGLAQCTRDLFGPSCKKCLDEAISELPDFCDGKEGGRVVGGSCYVRYELYPIVEA* 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g1166 249 ProSiteProfiles Gnk2-homologous domain profile. 141 246 IPR002902 -
Pvu5g1166 249 Gene3D - 142 245 IPR038408 -
Pvu5g1166 249 Gene3D - 33 135 IPR038408 -
Pvu5g1166 249 Pfam Salt stress response/antifungal 155 244 IPR002902 -
Pvu5g1166 249 Pfam Salt stress response/antifungal 39 132 IPR002902 -
Pvu5g1166 249 ProSiteProfiles Gnk2-homologous domain profile. 33 135 IPR002902 -
Pvu5g1166 249 PANTHER CYSTEINE-RICH REPEAT SECRETORY PROTEIN 38 31 247 - -
Pvu5g1166 249 PANTHER CYSTEINE-RICH REPEAT SECRETORY PROTEIN 38-RELATED 31 247 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g1166 Pvu-Chr5 32932070 32934548 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu5g1166 1 248 Pollen Coat Proteome AT4G20670 34.375 1.93e-45 151
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g1166 - - pvu:PHAVU_005G112700g 511.916
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g1166 5 32932070 32934548 Pvu5g1166 5 32932070 32934548 ECH