Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g1159 ATGGGCGATGGAGGCGTCCCGTGCATGCCTTTGCAGTATATTATGGAGAGGTTGCCGAGTTCCGAGAAGACTGTTGTGTGCGGAGGCAAGAGTGGGAATGGCTTCAATTCCAAGTTGTTCAAGTTTGCTGGCAATGAGAGGAGGAAGATGAAGGCGAGAAAGAGTGAATTGGGTTTGGACAGAGTGAGCAAGAGGAGCAGCAATGACGTTGAGAATGGTGGCGAAGTGGAGAAGCAGCAAGAAAAGGTGCAGAAGGAGGAAGTTGAGGAGGGTGAATTGGGCACTTTGAAGTGGCCTAGGACTGACCTGGAAAATGGGGAGTTCGTGCCAGAGATGCCGCCGCCACCCCCACCGAGGAGGGGCGAGATTGAGAACGGGGAGATTGTGAGTGAGAAGTGGAAAGGACGGGAGCTGGAGAAGGGGGAGATTGCTTCTGGAAAATGGAGAAAAGAGGATGTTGAAAGAGGGGAGATAGTTCCTGAGAAGGGTGGTAGGAAAGGGGAAGTTGAGAGAGGTGAATATGGGTCGTGGAGAGGAGTAAATGATGAAATTGAGAAGGGAGAATTCATTCCGGATAGATGGTACAAGGCAGATTATGATAGCAGTAGAATCCGCAGGTACCATTCAGGTAGGGACAAAGGGTGGAAAGTTGAACGTGAACGTGAACGTGAAAGTACACCTTCTGGGAGATATACAGGGGATGATTTTTTTAGGAAGAAGGAATTGAATATTCGTGGGAGTCAGCATGCTAAAAGTTCTCCCAGGTGGGAGGGTGGACAACAGCGGAATGTAAGGATCAGTTCAAAGATTGTGGATGACGAGAAGAACGTTCACAGCAATGGTAAGGACCATGCACGAGATTACACTTCGGGAAGTCGCTTGAAGAGGCTTGGCAATGATACTGACAGCTATGAGCGGAAGCATTCTGCAGATTATGCCGGTTTAAAAAGCCGAAGACTTTCTGATGATACCGGTCGCCAAGTTTATCCAGAAAACTATTCTCGTCGTTCTGTGGAACGGTCTTACCGAACTAATAATGCTACAAAATTATCGGCAGATAAATATTCAAGTAGAAATCATGAATCTTCTTTGTCTACTAGACAGGTTTATGATAGGCATGGGCGCAGCCCTGGTCATTCTGAGCGATCCCCACGAGACCGAGGCAGGTATTATGATCATAGAGATAGAACTCCGGTACGCCGGTCTCCTTGTGGTCGTGACAGATCTCCCTATAACAGGGAGAAATCTCCACCACATGGTCGGGAGAGGTCACCATATCTGTATAACCGGGAGAAATCCCCTCATGGTCGGGAGAGGTCGCCATACACAAGGAACTCGGACAGAAATCGTCAGCATGATCATAAATTGAGAAGTCCAACACGAGCTGAGCAGTCACCGCCAGATCGAAGTCGACGACATGATCCTAGGGATAGTACCCCAATTTTGTCAGAAGCATCTCCCCTAGATCAGGCTAGGAAAGACAGTCGTCGTGATTCAAGTTGTAAACCCTTGCCTAGTGAAAAACATGATTCCCAAAATTGTTCTAAGGATATTGAGGATAAGCAGACTCAGAGGGATTCAAACTGTTCAAGTACCGAGTCTCAGAATGAAAAAAGTGTGCAATATGCCATTAAGTCTGTTGAGAAAGATACCTGCAGTCAACCTTTAAAGGAACACCAGAGTTGCAGCCCAATTGTTACCCACAAAGAATCTCCTCACTCCGAGCTACCTCCTGAGGAGATGCCTTCTATGGAGGAAGATATGGACATTTGTGATACCCCTCCACATGTCCCTGTGGTGACAGATTTGTCATCAGGGAAATGGTATTACCTGGACTATGGTGGTGTAGAGAATGGGCCTGCTAAATTGTGCGACATCAAGGTCCTTGTGGATGAAGGTGTACTAATGTCAGATCACTTTATCAAGCACCTAGATAGTGATAGGTGGCTAACAGTTGAAAATGCCGCGTCACCTTTGGCACCTCTGAACTTTCCTTCAATTGTGTCTGATACCATAACTCAACTGGTAAATCCTCCAGAAGCTCCTGGTAATATCTTGTCAGATACACCTGATATTCTTCAATCTGCTCCTGAGTGTCATCAGGAAATGCTAACCTCCTCGCCTCCATTAGTGTGCCCTAGTGACAGTTTGCGTTCATCTGAACTTTTGGAGGACTTCCACATTGATGAAAGAGTTAAAAATCTGTTAGAGGGTTATGATGTCACTCCTGAGATGGAACTTGAGGCAATAAAAGAAGTGTTGCTAATGAATTTTGAAAATGCAAAAGGGGAGGGATCGAGAGACTATGAAGGTTTTCCTTGGAGTGTTTCCTGCCTTGGGGAAGATTGTGATTCTAGTACTGATTTAGCATCTAGAGATTCTGAGTCACAGTTAAGTATGTCATCTGATAAGGATAATGGACTTGGCTTTGGTATTTCTAGTGACTGGTTTTCCACCCGTTGGTCATGTAAAGGTGGTGACTGGAAGAGGAATGATGAGGCCCTGGATAGATATTCTAGAAAGAAACTTGTCCTAAATAATGGTTTTTCATTGTGTCAAATGCCAAAGTCAGGATGTGAAGATCCTCGTTGGCCTCAAAAAGATGACTTGTATTTTCCTTCTCAAAGCAAGAGGCTTGATCTTCCTCTGTGGGCTTTCAGTGCTGATGAGCGGGATGAATGCAGTGTTGCAGGCAGATCCGTTCAAAGTAAGCCTGTTTCTGTGAGAGGAGTGAAAGGGAATGTTCTTTCAGTGGTCAGGATAAATGCATGTGTAGTAAAGGACCAGGGGTCATTGGTCTCTGAGTCACGGCACAAGACACGGGGCAAGGAAAGACATCATTCTAGGTCAAGTCGGCCCTTCTCTGCAACCAGTGATAGCAAGAGATCATCAACTGACCATGATTCTCAGTTAAAAGCTTTTAGTGATCAAGGTTCTTACAAGATCATGGAATTCCTTAATACTCCTAAAGATCATCTTTGTACTATCCATGAGTTGCAATTACATTTGGGTGACTGGTATTATTTTGATGGTTCTGGGCGTGAAAGGGGGCCCTCATCATTTTCAGAGCTACAGTATTTAGTAGATCAAGGTATCATAAAAAGGCATAGCAGTGTGTTCAGGAAAAGTGATAAACTCTGGGTTCCTATTACCTCTGCAACAGAAACATCTGATGGTAGTCTCACGATCCAACAAGAAAGCAGTTCAATATCTGGTGCATGCTTTGGTTTTCCGTCAAAGCAAACTCAAGCATGCGGTGAACCTTACACAAATTCAAGTTTGTTTAACAGCTTACATCCTCAGTTTGTTGGTTATACTCGTGGGAAGCTACACGAGCTGGTAATGAAATCATATAAAAGCCGAGAGTTTGCTGCTGCCATAAATGAGGTTTTAGATCCCTGGATCAATGCAAGACAACCAAAGAAAGAAATTGAAAAACAACTATATTGGAAATCAGAAGGTGATGCACATGCTGTCAAGAGAGCCCGGATGTTGGTTGATGATAGTGACGAGGACAGTGATTTGGAAGATGGTGATTTTACTATTGAGAAGGATGAATCCAGTTTTGAGGATCTATGTGGTGATGCTACTTTACCTGAAGATGAAATTGGTGTTACTGATTCTCAAATGGGAAGCTGGGACAATTTGGATGGTCGTGTGCTAGCACGGATTTTCCATTTTTTGAAATCTGATTTGAAGTCCCTTGTTTTTGCTTCAATGACTTGCAAGCGCTGGAGAGCTTCTGTAAGGTTTTATAAAGAAATGTCAATACAGGTCAACTTGTCATCCTTGGGTCATTCCTGTACCGATACTATGTTGTGGAACATTTTGAATGATTACGAGAAAGAAAAGATCAATTCTATAATTCTAAGGGGTTGTGTTAATATTACAGCTGAGATGCTTGAGAAAGTTCTTCTTTCATTTCCTGGTTTATTTACTGTAGACATTAGAGGGTGCAACCAGTTTGGAGAGCTGACTCTTAAGTTTGCAAATGTGAAATGGATCAAGAGCCGAAGTTCACACTTGACTAAAATTTCTGAGGATCCTCATAAAATTAGAAGCCTTAAAAATATTGCAGAGCTAACCTCATCTGTATCCAAATCCAGCAGTATAGGTATAGATGATTTTGGGCAATTGAAGGATTATTTTGATAGTGTGGATAAGAGAGATACCAAGCAATTATTCCGTCAAAACTTGTACAAGCGATCAAAACTATATGATGCTAGAAAGTCCTCCTCCATTCTATCGAGGGATGCTCGCACAAGACGTTGGGCAATCAAGAAATCTGAAAGTGGTTATAAGAGGATGGAGGAATTCCTTGCCTCAAGACTCAGGGAAATTATGAAGACAAACTCTTGCGATTTTTTTGTGCCCAAGGTTGCAGAAATCGAGGCTAAAATGAAAAATGGTTACTACAGTAGCCGTGGGTTGAATTCTGTGAAAGAGGACATAAGTAGAATGTGCCGTGATGCCATAAAAGTGAAGAATCGGGGTGATGCTAGTTACATGAATCATATTATCACACTGTTTATTCAGCTTGCAACACGGTTGGAAGAGAGTTCTAAATCTGTGCATGACAGAAATGCATTACTGAAATCATGGGACAATGACTTGCCTGCAGTCTCCTGCTCTACTTTGTCAAAGTATAAGAAGAATAAGTTGGTGAATGAAAGGAAGTATAGGAGTAATGGGACACATGGTTTGGATAATGTTGAATATACCTCTGATCGAGAAATTAAGAGGCGATTATCAAAGCTGAACAAGAAATCTATGGACTCAGAGAGTGAAACATCTGACGATGATCTTGATATGTCCTATGAAGATGGAAAGAGTGATAGTGATACTACAACCTCTGACTCTGAAAGTGAACGAGAAGTACATTCAGAAAGTCTAATCAGGGAGTCAAGAGGGGAAGGATACTTGACATTTGAGGAAGAGTTGGATTTTATAACTGATGATCGAGAGTGGGGTGCACGCATGACAAAAGCAAGTTTGGTTCCTCCAGTTACCAGGAAATATAAAGTCATTGATGAATATTGCATTGTAGCTGACGAGGATGATGTGCAAAGGAAGATGAGGGTTTCATTACCAGACGACTATGCTGAGAAGCTGAGTGCACAAAAGAATGGCACTGAGGAGTCAGATATGGAACTTCCTGAAGTGAAAGATTACAAACCTAGAAAGCAGCTAGGATATGAGGTTATTGAGCAAGAAGTTTATGGAATTGATCCTTTTACACACAATCTTTTGCTTGATTCTATGCCAGAGGAGTTAGATTGGACTCTGATGGAGAAGCATTTGTTTATAGAAGATACTCTACTTCGAACATTGAATAAGCAAGGTAGAAATTTTACTGGAACTGGAAGCACTCCAATGAGCTACCCATTGCGGCCTGTTGTTGAAGATATTAAAAGACATGCTGAGGAGGATTGTGATGCAAGAATGGTTAAAATGTGTCAAGGAATTCTAAAGGCCATGGATAGTCGTCCTGATGACAAATATGTAGCTTATAGGAAGGGGCTTGGTGTTGTTTGCAACAAGGAAGAAGGATTTGCGGAAGATGATTTTGTTGTGGAGTTTTTGGGAGAGGTTTATCCTGTGTGGAAGTGGCTTGAGAAACAAGATGGGATTCGATCTCTGCAGAAAGATAGTAAAGATCCAGCACCAGAATTCTACAACATCTACCTTGAGAGGCCAAAGGGTGATGCTGATGGGTATGACTTAGTTGTTGTTGATGCCATGCATATGGCTAATTATGCCAGTCGAATATGTCATTCGTGCCGACCTAACTGTGAAGCCAAGGTTACTGCTGTTGATGGTCAGTATCAAATTGGTATTTATAGTGTTCGTAAAATTCAACATGGTGAGGAGATCACTTTCGACTACAATTCTGTAACAGAGAGCAAGGAGGAGTATGAAGCTTCAGTTTGTTTGTGTGGAAGCCAAGTATGCCGTGGGAGCTATCTAAATTTGACTGGTGAAGGGGCTTTCCAAAAGGTTCTGAAGGACTCTCATGGAATTCTCGATCGGCATTATTTGATGCTAGAAGCTTGTGAATTAAATTCTGTGTCTGAAGAGGATTATAATGACCTTGGAAGAGCTGGTTTAGGCAGTTGTTTGCTTGGAGGCCTGCCAGATTGGCTTGTTGCTTATGCGGCTCGCCTTGTGAGATTTATCAATTTTGAAAGAACAAAACTTCCTGAAGAAATTCTAAAGCATAATCTGGAAGAGAAAAGAAAATATTTTTCAGATATATGTCTTGAAGTTGAAAGGAGTGATGCCGAAGTTCAGGCTGAGGGTGTTTACAACCAAAGGCTTCAGAATCTTGCTGTCACTCTTGATAAGGTAAGGTATGTTATGAGATGTATTTTTGGCGATCCACGGAAAGCACCACCTCCTCTTGAGAAGCTTAGTCCCGAGGCAACTGTTTCCTTCCTCTGGAAAGGTGAGGGTTCATTTGTTGAGGAGCTTCTTAAGTGCATCGCTCCTCATATTGAAGAAGACATCTTGAAAGATCTGAAGTTTAAAATTCATTCTCACGATCCTTCAAATTCAGTAGATATTCAAAAAGAGCTTCGAAAATCTTTGTTATGGTTGAGGGACGAGGTCCGAAATCTTCCTTGTACATATAAATGTCGGCATGATGCTGCTGCTGACTTAATCCATATTTATGCTTATACCAAGTACTTCTTTAGGATACAGAATTATCAAACGATTACATCACCACCTGTCTATATTAGTCCACTTGACTTAGGTCCCAAGTACACTAACAAGTCGGGAGCAGAATTTCAGGAGTACCGAAAGATATATGGTGAAAATTATTGTTTAGGACAGCTGATATTTTGGCACAACCAGAGTAATGCAGATCCAGATCGGAGCCTGGCTAGAGCTAGCAGGGGTTGCTTGTCTTTACCAGACACCAGTTCCTTTTATGCCAAGGCGCAGAAGCCCTCTCGACATTGTGTTTATGGTCCAAGGACCGTCAGATCTATGCTTGCTAGAATGGAGAAGCAGCCGCAGAGATCTTGGCCCAAAGACCGGATATGGTCATTCAAAAGTTTTCCGAAATTCTTTGGTAGCCCAATGTTAGATGCTGTAGTAAATAACTCTGCACTGGACAGGGAGATGGTTCATTGGTTGAAGCACAGACCTGCCATATTCCAAGCCATGTGGGACCGTTAA 7182 0.4263 MGDGGVPCMPLQYIMERLPSSEKTVVCGGKSGNGFNSKLFKFAGNERRKMKARKSELGLDRVSKRSSNDVENGGEVEKQQEKVQKEEVEEGELGTLKWPRTDLENGEFVPEMPPPPPPRRGEIENGEIVSEKWKGRELEKGEIASGKWRKEDVERGEIVPEKGGRKGEVERGEYGSWRGVNDEIEKGEFIPDRWYKADYDSSRIRRYHSGRDKGWKVERERERESTPSGRYTGDDFFRKKELNIRGSQHAKSSPRWEGGQQRNVRISSKIVDDEKNVHSNGKDHARDYTSGSRLKRLGNDTDSYERKHSADYAGLKSRRLSDDTGRQVYPENYSRRSVERSYRTNNATKLSADKYSSRNHESSLSTRQVYDRHGRSPGHSERSPRDRGRYYDHRDRTPVRRSPCGRDRSPYNREKSPPHGRERSPYLYNREKSPHGRERSPYTRNSDRNRQHDHKLRSPTRAEQSPPDRSRRHDPRDSTPILSEASPLDQARKDSRRDSSCKPLPSEKHDSQNCSKDIEDKQTQRDSNCSSTESQNEKSVQYAIKSVEKDTCSQPLKEHQSCSPIVTHKESPHSELPPEEMPSMEEDMDICDTPPHVPVVTDLSSGKWYYLDYGGVENGPAKLCDIKVLVDEGVLMSDHFIKHLDSDRWLTVENAASPLAPLNFPSIVSDTITQLVNPPEAPGNILSDTPDILQSAPECHQEMLTSSPPLVCPSDSLRSSELLEDFHIDERVKNLLEGYDVTPEMELEAIKEVLLMNFENAKGEGSRDYEGFPWSVSCLGEDCDSSTDLASRDSESQLSMSSDKDNGLGFGISSDWFSTRWSCKGGDWKRNDEALDRYSRKKLVLNNGFSLCQMPKSGCEDPRWPQKDDLYFPSQSKRLDLPLWAFSADERDECSVAGRSVQSKPVSVRGVKGNVLSVVRINACVVKDQGSLVSESRHKTRGKERHHSRSSRPFSATSDSKRSSTDHDSQLKAFSDQGSYKIMEFLNTPKDHLCTIHELQLHLGDWYYFDGSGRERGPSSFSELQYLVDQGIIKRHSSVFRKSDKLWVPITSATETSDGSLTIQQESSSISGACFGFPSKQTQACGEPYTNSSLFNSLHPQFVGYTRGKLHELVMKSYKSREFAAAINEVLDPWINARQPKKEIEKQLYWKSEGDAHAVKRARMLVDDSDEDSDLEDGDFTIEKDESSFEDLCGDATLPEDEIGVTDSQMGSWDNLDGRVLARIFHFLKSDLKSLVFASMTCKRWRASVRFYKEMSIQVNLSSLGHSCTDTMLWNILNDYEKEKINSIILRGCVNITAEMLEKVLLSFPGLFTVDIRGCNQFGELTLKFANVKWIKSRSSHLTKISEDPHKIRSLKNIAELTSSVSKSSSIGIDDFGQLKDYFDSVDKRDTKQLFRQNLYKRSKLYDARKSSSILSRDARTRRWAIKKSESGYKRMEEFLASRLREIMKTNSCDFFVPKVAEIEAKMKNGYYSSRGLNSVKEDISRMCRDAIKVKNRGDASYMNHIITLFIQLATRLEESSKSVHDRNALLKSWDNDLPAVSCSTLSKYKKNKLVNERKYRSNGTHGLDNVEYTSDREIKRRLSKLNKKSMDSESETSDDDLDMSYEDGKSDSDTTTSDSESEREVHSESLIRESRGEGYLTFEEELDFITDDREWGARMTKASLVPPVTRKYKVIDEYCIVADEDDVQRKMRVSLPDDYAEKLSAQKNGTEESDMELPEVKDYKPRKQLGYEVIEQEVYGIDPFTHNLLLDSMPEELDWTLMEKHLFIEDTLLRTLNKQGRNFTGTGSTPMSYPLRPVVEDIKRHAEEDCDARMVKMCQGILKAMDSRPDDKYVAYRKGLGVVCNKEEGFAEDDFVVEFLGEVYPVWKWLEKQDGIRSLQKDSKDPAPEFYNIYLERPKGDADGYDLVVVDAMHMANYASRICHSCRPNCEAKVTAVDGQYQIGIYSVRKIQHGEEITFDYNSVTESKEEYEASVCLCGSQVCRGSYLNLTGEGAFQKVLKDSHGILDRHYLMLEACELNSVSEEDYNDLGRAGLGSCLLGGLPDWLVAYAARLVRFINFERTKLPEEILKHNLEEKRKYFSDICLEVERSDAEVQAEGVYNQRLQNLAVTLDKVRYVMRCIFGDPRKAPPPLEKLSPEATVSFLWKGEGSFVEELLKCIAPHIEEDILKDLKFKIHSHDPSNSVDIQKELRKSLLWLRDEVRNLPCTYKCRHDAAADLIHIYAYTKYFFRIQNYQTITSPPVYISPLDLGPKYTNKSGAEFQEYRKIYGENYCLGQLIFWHNQSNADPDRSLARASRGCLSLPDTSSFYAKAQKPSRHCVYGPRTVRSMLARMEKQPQRSWPKDRIWSFKSFPKFFGSPMLDAVVNNSALDREMVHWLKHRPAIFQAMWDR* 2394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g1159 2393 SMART set_7 1829 1969 IPR001214 GO:0005515
Pvu5g1159 2393 MobiDBLite consensus disorder prediction 147 170 - -
Pvu5g1159 2393 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE ATXR3 1 2392 - -
Pvu5g1159 2393 SUPERFAMILY SET domain 1838 1986 IPR046341 -
Pvu5g1159 2393 MobiDBLite consensus disorder prediction 247 266 - -
Pvu5g1159 2393 Pfam SET domain 1905 1963 IPR001214 GO:0005515
Pvu5g1159 2393 MobiDBLite consensus disorder prediction 267 325 - -
Pvu5g1159 2393 MobiDBLite consensus disorder prediction 210 584 - -
Pvu5g1159 2393 MobiDBLite consensus disorder prediction 527 548 - -
Pvu5g1159 2393 MobiDBLite consensus disorder prediction 489 526 - -
Pvu5g1159 2393 MobiDBLite consensus disorder prediction 365 479 - -
Pvu5g1159 2393 MobiDBLite consensus disorder prediction 50 97 - -
Pvu5g1159 2393 MobiDBLite consensus disorder prediction 50 131 - -
Pvu5g1159 2393 MobiDBLite consensus disorder prediction 210 246 - -
Pvu5g1159 2393 MobiDBLite consensus disorder prediction 934 970 - -
Pvu5g1159 2393 Pfam Protein SET DOMAIN GROUP 2 C-terminal 1974 2393 IPR045606 -
Pvu5g1159 2393 Gene3D SET domain 1807 1994 IPR046341 -
Pvu5g1159 2393 ProSiteProfiles SET domain profile. 1820 1963 IPR001214 GO:0005515
Pvu5g1159 2393 MobiDBLite consensus disorder prediction 1584 1633 - -
Pvu5g1159 2393 CDD SET_SETD2-like 1837 1985 - -
Pvu5g1159 2393 MobiDBLite consensus disorder prediction 339 364 - -
Pvu5g1159 2393 MobiDBLite consensus disorder prediction 1608 1633 - -
Pvu5g1159 2393 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE ATXR3 1 2392 - -
Pvu5g1159 2393 SUPERFAMILY F-box domain 1207 1249 IPR036047 GO:0005515
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Pvu5g1159 SET 4.4e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g1159 K22748 - gmx:100776205 4179.02
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g1159 5 32857504 32872881 Pvu5g1159 5 32857504 32872881 ECH