Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g1148 ATGAAAAGAGAAGGGGTTGTGTTGTCGTTCTATCTTCTTCTTCTCTGGCTGCTGCTATGCTTCCAAATATGTTTGGGAGGAGATACTCTGAAGGCTACCCAGAAGATAACTGACCAAAGAAACCTTGTTTCATCAAACGCCACATTTGAGCTGGGCTTCTTTTCTCCTCCTGGTGTGAAGAGTGGCGAGAAAAGATACCTGGGGATATGGTATCACAAGCTGGAACCACAAACAGTGGTGTGGGTTGCCAATAGAGATGACCCTGTTGCAGATTCCAGTGGAGTTTTTCGAATTGCGGAGGATGGAAATGTAGTTGTTGAATATGCATCCAAAAGCCTCTGGTCCTCCAAACTTGAACCATCCTCGTCCACAAACAGAACATTGAAGCTCCTAGATTCGGGGAATCTAGTACTGATAGATGACTCTGAAACGACATACCCGTGGGAAAGCTTCAAAAACCCAACAGACACGTTTCTTCCCGGCATGAAAATGGAAGCGACTTTGTCGTTGACTTGTTGGAGAAACTCCGCTGACCCAACACCTGGGAGCTTCACCTTCAAGCTGACTCAACAGGAAGGGAAACAAAGCTTCCGTGTGCAAAAGGAAACACAAATCTACTGGGCACTTGATGAACCTGACACAGAAGCGGCTTCCCAGATGGTATTTAATTTGTTGAACAACGACATCTCGTCTAATAAATCGTACAGTTATTCTAACAAAACACTCTTCGTATCACAACCTTCCATGTACAATAAATCAAGGCTGTTGATGAATTCTAGCGGGGAGATAGTGTTTCTGCAGTGGGATGAGAAAGAATTCCAATGGAATAAGAAATGGTGGATGCCAAAGGACAAGTGTGACACGCATAATTATTGCGGGAACTTCGGCATATGTAACAGAGAAAACTACTTTCCGCGGTGCAAATGTTTGCCAGGATTCATTTCTAATGTAGAATCGAATTCCGAAGGGTGTAGGAGAAAATCAATATCGTGTACCAACAAAGACGTGACGTTCCTGAACTTAACCAACATAAAACTGGGGAACCCAGACCAACGAAATTATACTGAAACAGAAGCAGAATGCCAATCCACATGCATCAACATGTGTTCCGAAACACAGTGCCAGGCATATTCATTTAATAATTCTATATACGGTGACCGTGGTTCATCCTCGTGCAATATCTGGACGCGGAATTTACCTTCTCTTCTCGAGAACTTCCCGCGCGGTCGTGATCTTTCTATCTTGGTTAACACAGCAGATATAGCACCAACTGCAAAATCGTGTGAACCTTGCGGCACATATGCAATTCCTTATCCGCTCAGCACTGGGCCAAACTGTGGAGACCCCTCGTACAACAAGTTCAATTGCACCAAATCCACTGGCAAAGTTAGTTTCATGATGCGCGGGGGAATATCATACCCAGTAACTGAGATCGATGAAGATAACAGAATGTTTTTCATTCAACCAGACTATTCCAATTCGTTAAATCCCAGTTTCAACCCTCAAAATAGCATTGATTTTCCGTTTAGTCTAGCCGAGTACACTGAAGGGGTCGTAATAAAAATCAATTGGCGACCAGCGCCAGAACCGCCGTGTAGTAAGCCTATAGATTGCCTGAATTGGCCACATTCGACATGCAGAGCAACGAGGGAAGGAGAAATTAGGTGTCATTGTGATTCAAACTATATTTGGAATGCCACAATCATGAGATGCACCCAAGAAGAGCCATCAGGAAATCATTCAACCCTACTGGAATTGATTCTTTTAGTAACTCTTTGTTCCCTGGCTACTGTGGCATGCATAACAGGATTTGGCATTGTGTGGAAAAAGAAAAAGGCCCGTAAGCTTGATGGCGCAAGCACCCGAATTCAGGAGAGCTTGCATGAGAGTGAAAGACATGTCAAAGGTCTGATTGGTTTAGGAAGTTTAGAAGAAAAAGACATTAAAGGCGTTGAAGTGCCTTGTTACACTTTTGCAAGCATTCTCGCAGCTACAGATAATTTCTCAGACTCTAACAAGCTTGGAAGAGGAGGCTATGGACCTGTTTATAAGGGAACGTTTCCTGGAGGTCAAGAAATAGCTGTGAAGAGACTTTCAAGTGTTTCCACTCAAGGCCTACAAGAATTCAAGAATGAGGTTATTTTGATTGCCAAACTTCAACATCGAAACCTGGTCAGACTGAGGGGCTATTGCATAAAAGGGGTTGAAAAAATCTTACTTTATGAATACATGTCAAACAAGAGCTTAGACTCATTTATATTTGACCGAAGTCGAACTATACTCTTGGATTGGCCAATGCGGTTTGAGATAATTGTAGGCATTGCACGAGGCATGCTCTACCTTCATCAAGACTCTAGATTGAGAGTGATTCATAGAGACCTGAAAACCAGCAATGTTCTTCTAGACGAGGAAATGAATCCAAAGATATCAGACTTTGGCCTTGCCAAAATATTTGGAGGAAAAGAAACTGAAGCAAGTACAGAGAGAGTGATGGGAACCTTTGGATACATGGCTCCAGAGTACGCTTTGGATGGATTTTTTTCAGTCAAATCTGATGTTTTCAGCTTTGGAGTAGTCCTACTAGAGATTCTTAGTGGGAAAAAGAACACAGGATTCTTTGAGTCCAAACAAATCTCTAGCCTTTTGGGTTATGCATGGAATTTATGGTCAGGGAACAAGCTACTGGATTTAATGGATTCTTGCCTTGGTGAAACATGCAACCAAAATCAATTCATTAAGTGTGCAATTATTGGGCTATTATGCACACAAGATGAACCAATTGATCGACCCACTATGTCAAATATTTTATACATGCTTGACAAAGAGACAACAACCATGCCAATTCCCAGACAACCAACATTTTTTATGACGAAGCGTTATTCTAGCTCAGCTTCCTCTTCTACCAATCCAGAAATAAGTTTGCATCTTGACACCAGTTATCAAGAAGGTCGATAG 2955 0.4234 MKREGVVLSFYLLLLWLLLCFQICLGGDTLKATQKITDQRNLVSSNATFELGFFSPPGVKSGEKRYLGIWYHKLEPQTVVWVANRDDPVADSSGVFRIAEDGNVVVEYASKSLWSSKLEPSSSTNRTLKLLDSGNLVLIDDSETTYPWESFKNPTDTFLPGMKMEATLSLTCWRNSADPTPGSFTFKLTQQEGKQSFRVQKETQIYWALDEPDTEAASQMVFNLLNNDISSNKSYSYSNKTLFVSQPSMYNKSRLLMNSSGEIVFLQWDEKEFQWNKKWWMPKDKCDTHNYCGNFGICNRENYFPRCKCLPGFISNVESNSEGCRRKSISCTNKDVTFLNLTNIKLGNPDQRNYTETEAECQSTCINMCSETQCQAYSFNNSIYGDRGSSSCNIWTRNLPSLLENFPRGRDLSILVNTADIAPTAKSCEPCGTYAIPYPLSTGPNCGDPSYNKFNCTKSTGKVSFMMRGGISYPVTEIDEDNRMFFIQPDYSNSLNPSFNPQNSIDFPFSLAEYTEGVVIKINWRPAPEPPCSKPIDCLNWPHSTCRATREGEIRCHCDSNYIWNATIMRCTQEEPSGNHSTLLELILLVTLCSLATVACITGFGIVWKKKKARKLDGASTRIQESLHESERHVKGLIGLGSLEEKDIKGVEVPCYTFASILAATDNFSDSNKLGRGGYGPVYKGTFPGGQEIAVKRLSSVSTQGLQEFKNEVILIAKLQHRNLVRLRGYCIKGVEKILLYEYMSNKSLDSFIFDRSRTILLDWPMRFEIIVGIARGMLYLHQDSRLRVIHRDLKTSNVLLDEEMNPKISDFGLAKIFGGKETEASTERVMGTFGYMAPEYALDGFFSVKSDVFSFGVVLLEILSGKKNTGFFESKQISSLLGYAWNLWSGNKLLDLMDSCLGETCNQNQFIKCAIIGLLCTQDEPIDRPTMSNILYMLDKETTTMPIPRQPTFFMTKRYSSSASSSTNPEISLHLDTSYQEGR* 985
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g1148 984 CDD EGF_CA 284 314 - -
Pvu5g1148 984 SUPERFAMILY alpha-D-mannose-specific plant lectins 79 177 IPR036426 -
Pvu5g1148 984 Gene3D Transferase(Phosphotransferase) domain 1 744 949 - -
Pvu5g1148 984 Gene3D - 23 151 IPR036426 -
Pvu5g1148 984 Gene3D Phosphorylase Kinase; domain 1 641 743 - -
Pvu5g1148 984 Pfam PAN-like domain 331 400 IPR003609 -
Pvu5g1148 984 SMART serkin_6 668 912 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu5g1148 984 CDD STKc_IRAK 674 941 - -
Pvu5g1148 984 Pfam D-mannose binding lectin 78 167 IPR001480 -
Pvu5g1148 984 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 18 982 - -
Pvu5g1148 984 CDD B_lectin 33 154 IPR001480 -
Pvu5g1148 984 Pfam Protein tyrosine and serine/threonine kinase 671 936 IPR001245 GO:0004672|GO:0006468
Pvu5g1148 984 ProSitePatterns Serine/Threonine protein kinases active-site signature. 789 801 IPR008271 GO:0004672|GO:0006468
Pvu5g1148 984 SMART ntp_6 333 416 IPR003609 -
Pvu5g1148 984 ProSiteProfiles Bulb-type lectin domain profile. 27 151 IPR001480 -
Pvu5g1148 984 SMART blect_4 33 154 IPR001480 -
Pvu5g1148 984 Pfam S-locus glycoprotein domain 228 314 IPR000858 GO:0048544
Pvu5g1148 984 SUPERFAMILY Protein kinase-like (PK-like) 654 973 IPR011009 -
Pvu5g1148 984 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 18 982 - -
Pvu5g1148 984 ProSiteProfiles Protein kinase domain profile. 668 954 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu5g1148 984 ProSiteProfiles PAN/Apple domain profile. 331 419 IPR003609 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g1148 Pvu-Chr5 32471297 32475270 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu5g1148 642 977 Receptor kinase-like Gene Family AT4G23150 51.471 3.02e-121 383
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pvu5g1148 PK_Tyr_Ser-Thr 5e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g1148 - - vun:114185132 1558.89
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu11g1119 11 13221922 13227123 Pvu5g1148 5 32471297 32475270 PCT