Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g1143 ATGAAGAACCCAGGGTTCTGCATCTCTCTTCTCACCCTATTCTTCTCTTTGTTCACCCACAATTCCCTTGCGGCTCTCACAACCGTATCCGCAAACCAAACTCTCGCCGGGGACCAAACCCTCGTCTCTCAAGGTGAAATCTTCGAGTTGGGTTTCTTCAAACCGGGTGGCAATCTAGTTCTCTTGGATGGATCTTCTAAACAAGTTTGGTCAACAAACATGAGTTCTTCCGGGTCAGGTTCTGTCGTAATAGCTACTCTCCTCGATTCCGGGAATCTTGTGTTAAGAGATAAGCATAATGGTGCTTCTGCTTCCGAACCTTTGTGGCAGAGTTTTGATCACCCAACTGACACGTGGCTTCCGGGTGGCAAAATCAAACTGGATAATAAAACTAAGCAACCTCAATACCTCACTTCATGGAAGAACAACGAAGATCCTGCGACGGGTCTTTTTTCTCTGGAACTAGACCCCAAAGGAACCACTTCTTATTTGATTCTTTGGAACAAGTCTGAACAGTACTGGACAAGTGGTCCTTGGAATGGCCACATTTTTAGTTTAGTGCCGGAGATGAGGGCGAACTTTCTCTACAATTTCACGTTTGTGTCGAACGACAACGAGAGCTATTTCACATACTCCATGTATAACTCTTCCATTGTATCTCGGTTTGTGATGGATATCTCGGGGCAGGTCAAGCAACTCTCGTGGTTGGAGAATGCTCAGCAGTGGAACTTGTTTTGGTCACAGCCGAGACAACAGTGTGAGGTATACGCGTTTTGTGGTGTGTTTGGGAGCTGTACTGAGAATTCCATGCCGTATTGTAATTGCTTGCCGGGTTTTGAGCCAAAGTCACTGTCTGATTGGAATCTGGAGGATCACTCAGGTGGGTGTAAAAGGAAAACCAAGTTGAAGTGTGAGAATTTGAATCCCTCTAAAGGGGATAAGGATAGGTTTCTTGCGATTCCCAACATGGTGTTACCTAAACATGCACAATCTGTGGGATCAGGGAAGGCAGGGGAATGTGAATCGACTTGCTTAAACAACTGTTCCTGCACGGCTTATGCATATGACAGTAACGGGTGTTTTATTTGGATTGGCAACCTTTTGAATCTGCAGAAGCTATCTTTAGATGATAGTAGCGGAGAAACTTTGTATCTCAAACTTGCAGCATCTGAGTTTCATGATGATAAAAGCAGTAAGGGGACTGTTATTGGTGTGGCTGTGGGACTGGTTGTTGGCATTGGGGTTCTCTTGGCCATTCTTTTGTTTTTCGTGATTAGGCGAAGGAAGAGAATGGTTGGAGCAGGAAAGCCTGTGGAGGGTACGTTGGTCGCATTTGGGTACCGAGATTTGCAAAATGCAACGAGGAATTTCTCAGAGAAATTGGGGGGAGGAGGGTTTGGTTCTGTTTTCAAAGGAAAGTTGGGTGATTCAAGTGTGGTAGCAGTGAAAAGGTTGGAGAGTATTAGCCAAGGAGAAAAACAGTTCCGAACAGAAGTTAGCACAATAGGGACAGTACAACATGTTAATCTTGTTAGGCTCCGTGGATTCTGCTCTGAAGGTGCAAAAAAGCTGCTAGTTTATGATTACATGCCAAATGGCTCCTTGGATTTCCATTTGTTCCCCAACAAGATCCGTAAGGTGTTGTTGGATTGGAAAATGAGATACCAAATTGCGTTGGGAACAGCAAGGGGATTAACTTACCTTCACGAGAATTGTAGAGATTGTATCATACACTGTGATGTGAAGCCAGAAAACATTCTCCTAGATTCTGAATTTTGTCCCAAGGTTGCAGACTTTGGCCTGGCTAAGCTTGTTGGAAGGGATTTCAGCAGGGTTCTCACAACCATGAGAGGAACAAGAGGGTATCTTGCTCCAGAGTGGATTTCTGGGGTGGCTATCACAGCCAAAGCAGATGTGTACAGCTATGGAATGATGCTTTTTGAGTTTGTATCCGGAAGGAGGAACTCTGAGCCATCAGAAGATGGCAAATTTACCTTCTTTCCAACCTTTGCGGCAAATGTTGTTGTCCAAGGTGGTCCTGTTGTTAGCCTTTTGGACCATGGTTTGGAGGGCAATGCTGAGATTGAGGAGGTGACTCGAATAATAAAAGTTGCTTCATGGTGTGTCCAAGACAACGAGGCTCACCGGCCAAGCATGGCTCAGGTGGTTCAAATCCTTGAGGGGATCTTAGAGGTGAACATGCCTCCAATTCCAAGGTCCCTTCAAGTGTTTGTTGACAACCAGGAGAATTTAGTCTTTTACACCGACTCAAACTCCACACACAGTTCACAGGAGAAGAGCAACGTTTCAATTACCTCCTCCTCTCAAGCCAGAAGTAACATCTCTTCAGCAAGCTCCAAGGCCACTGGAGGAGAAAATTAG 2382 0.4521 MKNPGFCISLLTLFFSLFTHNSLAALTTVSANQTLAGDQTLVSQGEIFELGFFKPGGNLVLLDGSSKQVWSTNMSSSGSGSVVIATLLDSGNLVLRDKHNGASASEPLWQSFDHPTDTWLPGGKIKLDNKTKQPQYLTSWKNNEDPATGLFSLELDPKGTTSYLILWNKSEQYWTSGPWNGHIFSLVPEMRANFLYNFTFVSNDNESYFTYSMYNSSIVSRFVMDISGQVKQLSWLENAQQWNLFWSQPRQQCEVYAFCGVFGSCTENSMPYCNCLPGFEPKSLSDWNLEDHSGGCKRKTKLKCENLNPSKGDKDRFLAIPNMVLPKHAQSVGSGKAGECESTCLNNCSCTAYAYDSNGCFIWIGNLLNLQKLSLDDSSGETLYLKLAASEFHDDKSSKGTVIGVAVGLVVGIGVLLAILLFFVIRRRKRMVGAGKPVEGTLVAFGYRDLQNATRNFSEKLGGGGFGSVFKGKLGDSSVVAVKRLESISQGEKQFRTEVSTIGTVQHVNLVRLRGFCSEGAKKLLVYDYMPNGSLDFHLFPNKIRKVLLDWKMRYQIALGTARGLTYLHENCRDCIIHCDVKPENILLDSEFCPKVADFGLAKLVGRDFSRVLTTMRGTRGYLAPEWISGVAITAKADVYSYGMMLFEFVSGRRNSEPSEDGKFTFFPTFAANVVVQGGPVVSLLDHGLEGNAEIEEVTRIIKVASWCVQDNEAHRPSMAQVVQILEGILEVNMPPIPRSLQVFVDNQENLVFYTDSNSTHSSQEKSNVSITSSSQARSNISSASSKATGGEN* 794
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g1143 793 Pfam Protein kinase domain 458 724 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu5g1143 793 MobiDBLite consensus disorder prediction 756 793 - -
Pvu5g1143 793 Gene3D Phosphorylase Kinase; domain 1 423 529 - -
Pvu5g1143 793 CDD B_lectin 32 115 IPR001480 -
Pvu5g1143 793 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-KINASE PLANT 56 757 - -
Pvu5g1143 793 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-KINASE PLANT 4 56 - -
Pvu5g1143 793 ProSitePatterns Serine/Threonine protein kinases active-site signature. 576 588 IPR008271 GO:0004672|GO:0006468
Pvu5g1143 793 ProSiteProfiles PAN/Apple domain profile. 304 388 IPR003609 -
Pvu5g1143 793 Pfam PAN-like domain 312 369 IPR003609 -
Pvu5g1143 793 Gene3D Transferase(Phosphotransferase) domain 1 530 736 - -
Pvu5g1143 793 Pfam D-mannose binding lectin 55 141 IPR001480 -
Pvu5g1143 793 SMART serkin_6 455 725 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu5g1143 793 PIRSF SRK 55 778 IPR024171 GO:0004674
Pvu5g1143 793 PIRSF SRK 3 58 IPR024171 GO:0004674
Pvu5g1143 793 ProSitePatterns Protein kinases ATP-binding region signature. 461 483 IPR017441 GO:0005524
Pvu5g1143 793 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 4 56 - -
Pvu5g1143 793 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 56 757 - -
Pvu5g1143 793 Pfam S-locus glycoprotein domain 174 283 IPR000858 GO:0048544
Pvu5g1143 793 SUPERFAMILY Protein kinase-like (PK-like) 442 727 IPR011009 -
Pvu5g1143 793 SUPERFAMILY alpha-D-mannose-specific plant lectins 53 146 IPR036426 -
Pvu5g1143 793 CDD STKc_IRAK 461 729 - -
Pvu5g1143 793 SMART blect_4 32 115 IPR001480 -
Pvu5g1143 793 Gene3D - 27 162 - -
Pvu5g1143 793 CDD PAN_AP_plant 300 388 - -
Pvu5g1143 793 ProSiteProfiles Protein kinase domain profile. 455 730 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu5g1143 793 ProSiteProfiles Bulb-type lectin domain profile. 1 108 IPR001480 -
Pvu5g1143 793 SMART ntp_6 312 387 IPR003609 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g1143 Pvu-Chr5 32394261 32396765 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu5g1143 411 736 Receptor kinase-like Gene Family AT5G20050 42.500 1.47e-82 269
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Pvu5g1143 Pkinase 6.9e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g1143 - - gmx:100810583 1347.41
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g1143 5 32394261 32396765 Pvu11g1123 11 13303182 13306159 PCT