Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g1129 ATGGGAATTCTTAGAGAGCACGAACTTGTTCAAAAATTTAAGATTGGTCCATCAAAGAGAACAACTGCTTCTGTTCCTCTCTCATTCCTTGATTTGCCTTTAGCAGGTCCTATTTACGTGAGACGCCAATTCTTCTACCACTTTCCCCATTCCACACTTCATTTCTGTAAAACTACACTTCCTTCTCTCAAAACCTCTCTCTCTCAAACCCTTCAGCACTTCTTCCCTCTCGCTGGAAACCTCCTTTGTCCTCCACCACCCCACAAACCCTTCATTCGTTGCACCGATGATGACTCTATTCCCTTAACTGTCGTTGAGTCCAGAGCTGATTTCAACCACCTCTCATCTAACCACCCCAAAAGGCTCAAAGACTTGGATCACTTGGTTCCCAAGTTAACATGCACAAACATGCACGATGACACGTTTGTTTTCCCTTTGCTGGCATTGCAAACCACGATTTTCCCCAACCAAGGCCTTTGCATCGCGATTACCTATTGCCACGTGATGGATGATAGTTGTTGCAGCAATTTCATGAAGTATTGGTCTTCCATTTGTCGCAGTGGTGGAGTTGAGTTGAGTCTTGTTGAGAGGTCAACACCGTGCTTGGACAGGGGAGTGTTGAAGGACCCCAAAGGGTTAGAAGCTATCTTCTTAAGAGATTATTTTGAAGAGAGGTCAACTTGGAAGGAAAGACTAGTTGGGAAAACTTCTGAGGTTTGCAATGGGAATACTGAAGATTATGTTAAAGCAACGCTTGTTTTTGGAAGGGATGATATCGAGGGGCTGAGAAGATTGGTTTTGAATCAGTGGAGGAGAAGTGAAGAATTCGACACATCACAACATGTATCAAAATTTGTGGTGACGTGTGCCTTTGTGTGGGCTTGTTTGGTTAAAACAAGATGCAGAAGTGATTATGAAGAACAAGAGAAAGAGGAGTTCTTTCGTTTCTCTGCAGATTGCAGAGATCGCCTTGAGCATCCTGTGCCAGAAACATACTTTGGAAACTGCTTAACGTTATGTTTTGCCATGCTGAAAAGAAATGACCTGAAGGGAGAAGGTGGTTTTGTGAATGCGGTGAAGGTTATCAGAAGGGCAGTGACTGATATGAAAATTGACCTGTTTAAGGATGCAGAAAACTGGAGGGAATCATTTACGAAGATGTTTGCGTTGGGAAGTACTTTGATAGTTACTGGGTCACCCAAGTTCACTGTTTATGAGACTGATTTTGGATTTGGAAAGCCTAACAAGGTGGAAATGGTACATTCGTTGAAGGGTATGTCTTTAGCAGAAAGTAGAGATAAGGAAGGAGGACTTGAAGTTGGCATTGTATGTACAATCACAGAATTTGAATATTTAGTTTCTCTTATCAAGCAAGAACTTCAAGTTTCAAAATCCTTACTTTATTAG 1407 0.4208 MGILREHELVQKFKIGPSKRTTASVPLSFLDLPLAGPIYVRRQFFYHFPHSTLHFCKTTLPSLKTSLSQTLQHFFPLAGNLLCPPPPHKPFIRCTDDDSIPLTVVESRADFNHLSSNHPKRLKDLDHLVPKLTCTNMHDDTFVFPLLALQTTIFPNQGLCIAITYCHVMDDSCCSNFMKYWSSICRSGGVELSLVERSTPCLDRGVLKDPKGLEAIFLRDYFEERSTWKERLVGKTSEVCNGNTEDYVKATLVFGRDDIEGLRRLVLNQWRRSEEFDTSQHVSKFVVTCAFVWACLVKTRCRSDYEEQEKEEFFRFSADCRDRLEHPVPETYFGNCLTLCFAMLKRNDLKGEGGFVNAVKVIRRAVTDMKIDLFKDAENWRESFTKMFALGSTLIVTGSPKFTVYETDFGFGKPNKVEMVHSLKGMSLAESRDKEGGLEVGIVCTITEFEYLVSLIKQELQVSKSLLY* 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g1129 468 Gene3D - 7 233 IPR023213 -
Pvu5g1129 468 Pfam Transferase family 12 444 - -
Pvu5g1129 468 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 1 465 - -
Pvu5g1129 468 Gene3D - 244 463 IPR023213 -
Pvu5g1129 468 PANTHER - 1 465 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g1129 Pvu-Chr5 31834785 31836298 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu5g1129 63 414 Monolignol Biosynthesis Gene Families AT5G48930 21.526 3.96e-13 69.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g1129 - - gmx:100813644 801.201
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g1129 5 31834785 31836298 Pvu5g1129 5 31834785 31836298 ECH