Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g1128 ATGGCAGAACATAAACTTGTTGAGAAATCTGAAGTTGCTCCAGCATCACTTCCTAGTTCTACAACAAGAACAACCTCGTCCCTTCCCCTCTCATTCCTTGACTTGCCTTTAGCTGGTCCTATTTATGTCAAACGCCAATTCTTCTATCAGTTTTCCCATTCCACACACCATTTTTGTGAAACTACACTCCCCACTCTCAAACACTCTCTCTCTCTCATCCTTCAACACTTCTTTCCTCTCGCAGGAAATCTTCTTTCTCCTCCACCACCCCACAAACCCTTCATTCGCTGCACTGATGATGACACTGTCACTTTAACCATCATTGAATCCAAAGCTGATTTCAACCATCTCTCATCCAACCACCCTAAGAGTCTCAAAGAATTGGATCAACTGCTTCCCGAGTTGACATTCACAACCATGCATGATGATGAAGATGCCACGTTCATTTTCCCATTAGTGGCATTACAAGTCACGGTTTTCCAAAACCAAGGCCTTTGCATTGCCATCACGTATTGTCATGTGATGGATGGTAAGTGTTGCAATCATTTCATGAAGTCTTGGTCTTCTCTTTGTCAAAGTGGTGGAGTTGACTTGACACTTTTAGAGAAATCACCTCCATGGTTCGGCAGGGAAGTGTTGAAGGACCCCAGAGGACTCGAGGACATTTTCTTGAGAGACTATTTCGAAGAGAGATCAACTTGGAAGGACAAGCTCATTGATCAAACTCCTAAACGTGTGTGTGATGATGAGGAGTATTGTAAGGCGACGATTGTTTTTGGGAAAGATGATATTGAAGGCTTAAAAACATGGGCTCTAGCACAGTGGAAGAAAGATGAGGAGTTTAACTCCCCGCAATATTTGTCAAAATTTGTGGTCATTTGTGCTCTTGTGTGGGCTAGCTTGGTTAAAACAAGATGCAAAGATGATGATGATGAAGATGTGAAAGAAGAATACTTTCGTTTCGCTGCAGATTGCAGAGATCGCCTTGGTTATCCTATACCAGAAACATACTTTGGAAACTGCTTAACGCTATGTTATGCCATGCTTAGGAGAAATGAGCTTAAGGGAGAGGATGGTTTTGTGAATGCGGTGAAGGTAATTGAAAAGACAGTGAGTGACATGAAAAGTGAGCTGTTTAAGGATGCAGAACATTGGAGGGCTTTGTTTATAAAGACGTTTGTGTTGGGAACTACGTTGCTAGTTACTGGGTCACCCAGCTTCGATGTTTATGAGACTGATTTTGGATTTGGAAGGCCTACCAAAGTTGACATGGTACATTCCTTCAAGTGCATCTCTCTGGCCCAAAGTAGAGATGAGGAAGGAGGAGTTGAGGTTGGTTTGGTGTGTAAAAGTTCAGAGTTTGAACATTTATTTTACGCCATTGAACAAGGACTACAAACTGCAAAATCCTAA 1413 0.4225 MAEHKLVEKSEVAPASLPSSTTRTTSSLPLSFLDLPLAGPIYVKRQFFYQFSHSTHHFCETTLPTLKHSLSLILQHFFPLAGNLLSPPPPHKPFIRCTDDDTVTLTIIESKADFNHLSSNHPKSLKELDQLLPELTFTTMHDDEDATFIFPLVALQVTVFQNQGLCIAITYCHVMDGKCCNHFMKSWSSLCQSGGVDLTLLEKSPPWFGREVLKDPRGLEDIFLRDYFEERSTWKDKLIDQTPKRVCDDEEYCKATIVFGKDDIEGLKTWALAQWKKDEEFNSPQYLSKFVVICALVWASLVKTRCKDDDDEDVKEEYFRFAADCRDRLGYPIPETYFGNCLTLCYAMLRRNELKGEDGFVNAVKVIEKTVSDMKSELFKDAEHWRALFIKTFVLGTTLLVTGSPSFDVYETDFGFGRPTKVDMVHSFKCISLAQSRDEEGGVEVGLVCKSSEFEHLFYAIEQGLQTAKS* 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g1128 470 Gene3D - 4 239 IPR023213 -
Pvu5g1128 470 Gene3D - 249 467 IPR023213 -
Pvu5g1128 470 PANTHER - 2 470 - -
Pvu5g1128 470 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 2 470 - -
Pvu5g1128 470 MobiDBLite consensus disorder prediction 1 26 - -
Pvu5g1128 470 Pfam Transferase family 18 452 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g1128 Pvu-Chr5 31825755 31827427 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu5g1128 47 419 Monolignol Biosynthesis Gene Families AT5G48930 23.377 8.52e-17 80.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g1128 - - vra:106754247 781.171
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g1128 5 31825755 31827427 Pvu5g1128 5 31825755 31827427 ECH