Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g1127 ATGGCTCACCTGAGAAAACTTGATTCATTGAAGATCATAGAGCGGTGTCAAGTTTCTCCGCCACCAAATTGTGTTCCTTCAACCACCCTTCCCCTCACTTTCTTCGATATTCCATGGTTCTTCTGCAACTCCATCCAACGCATCTTCTTCTATCAGTTTCCCCACCCCACTCACCACTTCCTCCAAACAGCACTTCCCATTCTCAAACACTCTCTTTCCCTCTCTCTCCAACACTTCTTCCCCTTTGCCTCCAATCTTATCGTTCCACCACAACTCCATCTCTCTCACATCCGTTACCTTCATGGCGACTCTCTCTCCTTCACGGTTGCAGAGTCCACAGCAGACTTCACTCTCCTCACTTCTCATTCACCTCAAGACGTTCGAAACTGGCACCCTCTTCTTCCCACCTTGCCTACCCCTCGTCTGGAGCAAGATGGCACACGTGTGTTTCCTCTCATGGCCATTCAAGTCACGGTTTTCCCAAACTCCGGCTTCAGCATATGTCTTACCTTCAACCACTTTGCTGGGGATGGCAAATCACTTCATCACTTCATCAAGTTTTGGGCTTCTCTTTGCAAGGCAAAAGGGGACTTGGCTTCCATTGAAACCTCTCTGTCTCTTCCTTCACACGAGAGAGACAAAGTTAAAGACCCGAAGGGGCTTAAGTTCATTTACTTTCAAGAACTTGAACATTGTGATTCGAAAATCATGGAGTTCGCGGGGCTCGTGCGAGATCTTTCCACTAACAAGGTTCGCTTCAATGTTGTACTCGATCTTGAACAAGTTGAGAAACTAAAGAAATGGGTCTCTCTTAAATGTGCCACTAACGATTCGGGGGCATTACACATATCAACCTTTGTTGTTGCGTGCTCTACAATTTGGGTTTGCAAGATTCGGTCGGAAGAGAAAAAAGCCAATTGTTTTTCCCAAGAGTGTGATGAACTTTGCCACTTGGTGTTTCTAGCAGATTGCCGTGATCTTCCTGAATTTTCATTACCTTCCACGTACTTTGGAAATTGTCTAACCTCTTACATTGTGGCAATAAAGAGGAGTGAGCTAGTGGGAAAAAGTGGTATTGTAGGGGCAGCAAACTCCATTGAAAGACAAGTTAGAGATTTGAAGAGTGATGCTTTGAGAAATGCTGAAACGTTGATGTCAGATTACAGAGAGATAGGGAAACCAGGTAAATCTGTGCTGGTTATTGCAGGTTCACCAAAATTGGGTGTGTACCAGACTGATTTTGGTTGGGGAAAGCCTAAGAAATGTGAAGCAGCGCATATTGAATCGTCTGGATCAATTTCTCTTTCTGAATGTAGAGACGAAAAAAGAGGAATTGAGGTTGGATTGGCTCTTGAAAGGACTCACATGAATAAGTTCACCAACATCTTACAAGAGCAACTCCACAATATTAATAAATTGTAA 1422 0.4416 MAHLRKLDSLKIIERCQVSPPPNCVPSTTLPLTFFDIPWFFCNSIQRIFFYQFPHPTHHFLQTALPILKHSLSLSLQHFFPFASNLIVPPQLHLSHIRYLHGDSLSFTVAESTADFTLLTSHSPQDVRNWHPLLPTLPTPRLEQDGTRVFPLMAIQVTVFPNSGFSICLTFNHFAGDGKSLHHFIKFWASLCKAKGDLASIETSLSLPSHERDKVKDPKGLKFIYFQELEHCDSKIMEFAGLVRDLSTNKVRFNVVLDLEQVEKLKKWVSLKCATNDSGALHISTFVVACSTIWVCKIRSEEKKANCFSQECDELCHLVFLADCRDLPEFSLPSTYFGNCLTSYIVAIKRSELVGKSGIVGAANSIERQVRDLKSDALRNAETLMSDYREIGKPGKSVLVIAGSPKLGVYQTDFGWGKPKKCEAAHIESSGSISLSECRDEKRGIEVGLALERTHMNKFTNILQEQLHNINKL* 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g1127 473 PANTHER - 10 471 - -
Pvu5g1127 473 Pfam Transferase family 21 461 - -
Pvu5g1127 473 Gene3D - 247 471 IPR023213 -
Pvu5g1127 473 Gene3D - 9 240 IPR023213 -
Pvu5g1127 473 PANTHER COUMAROYL-COA:ANTHOCYANIDIN 3-O-GLUCOSIDE-6''-O-COUMAROYLTRANSFERASE 1-RELATED 10 471 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g1127 Pvu-Chr5 31785173 31786594 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu5g1127 37 465 Monolignol Biosynthesis Gene Families AT5G48930 24.000 1.81e-15 76.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g1127 - - vra:106771201 742.651
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g1127 5 31785173 31786594 Pvu5g1127 5 31785173 31786594 ECH