Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g1107 ATGGTAAGGCGATTGCTTTCAAGGGAAAGTAGTGAGCAGAAGATTAACATTGAGCTTGGAAGAACCGGTGAGGAGAGATCTGGTTCACAGTACAAGAGAGTGAAGATCCATGGCGAAGTTCTATTGGGATTTCTGTTGATCTGCATAGTCCAGTTTTCACATGCAGACACTGATCCCTCTGATGTTGCAGCAATAAATAACTTATATACTGCATTGGGCAACCCTGTTCTTCCTGGGTGGGTTCCTAGTGGAGGTGACCCGTGCGGACAAGCGTGGCAAGGTGTTCGATGTAATGGTTCAGTCATTCAAGAAATAACTCTGAATGGTGCAAACTTGGGAGGAGAACTGGGTGACGGCTTAGGAAGTTTTGTTTCTATCAGAGCAATAGTTCTAAACAACAATCACATTGGGGGAAGTATTCCATCCAGTTTGCCAGTCACTTTGCAACACTTCTTTCTTTCAGATAACCAGTTCACTGGTGGTATTCCAGCCTCTTTATCTACGTTGACTGAATTGAGTGACATGTCTCTTAACAACAATCTTTTAACAGGAGAAATACCAGATGCATTTCAGTCTCTTACTCAATTGATCAATCTAGATTTATCTAATAATAATTTGAGTGGGGAATTGCCTCCATCAATGGAGAACTTGTCAGCTCTGACCAGCGTACATTTACAAAACAATAACCTATCTGGGACCCTGGATGTTTTACAAGACCTTCCACTGCAAGATTTGAATGTTGAGAACAACCAGTTTGTTGGACCAATACCCCCGAAGCTGTTAAGCATCCCAAACTTTAGAAATGATGGAAACCCGTTTAATCTTAATGTCAATGCTACTATAGCCCCAGCACGTCCACCTCATTCTCCAGTGACGGTATCGCCATCAGGAACTGTGGTTTCTGGGACTCCATCCTCTGGACGTTTACCTACTAAACCTACGGATGGACCAACTGTAGCAAATGAATCAAATTCTGTGAAATCGAAAAAGAACACCAAAAGGGTGGTTTGGATATCTATTTCTGGTATATTGATGTTTGTTATTGTAGTACTGGGACTTCTTCTCTTTGTTCCGAGATGTAGAAGTAGCAGAAGAGAAAAGGTTAACAAAAGTTCCAAGCAACATCAAGTTGGCACATATGGAGGTGAAAGACATAATCCTAGAGAATATGAGGATTCTGTCCAACCACCTAGTCAAACTGAGAAAGTACCAAAAGGTGCTGTGGTTAGGCTGAAAAGGGATCATCAAGAGGAGGCAAGGAGAGTGAGGGCAATTCCAAAGCTACAAGGCGAGAAAGAGAAGGATGAACAAAGAATGGGAACACTCCCAAAGCTGTTAGATCATGAGATGGATATGAGTTCACTGGGTGTATATTCCATGCCTTCTCCACCACCACCTCCTCCACCTCCACCACTTACTACTGAGAGTGTGCTTGTTGAACCAACCTCATTCCGCAAAGGGGCTAACTTCAATCCTCCCAAAAGAAGTCCAGTTCCTCCCACTTTTGCAAAAACTTTTACCATTGCATCCCTTCAACAGTATACAAATAGCTTTTCTCAAGACAATCTTATAGGTTTAGGGATGCTGGGGACTGTGTATAAGGCAGAGCTTCCTGATGGAAAGATACTTGCTGTGAAGAAACTAGACAAGAGAGTTTCTGATCACCAAACAGATGATGAGTTTCTTGATTTGATAAACAACATTGACAGAATCCGGCATGCAAATATTGTTGAGCTTATTGGATATTGTGCAGAGCATGGTCAAAGGCTTCTTATTTATGAGTACTGTAGCAATGGTTCGCTGCAGGATGCACTCCATTCAGATGATGAATTCAAAACTAGACTGTCATGGAATGCTCGCATTCGAATAGCACTCGGTGCAGCTAGAGCCTTAGAGTACTTGCATGAGCAGTGTGCGCCACCTGTTGTACACAGAAATTTCAAGTCTGCTAACATTCTCCTTGATGATGATGTTTCTGTTCGTCTATCTGATTGTGGTTTGGCTCCATTAATAACTAAAGGTTATGTAAGTCAGTTCTCAGGACAACTGCTAGCAGCTTATGGCTATGGAGCTCCAGAGTTTGAGTCAGGAATTTACACATACCAAAGTGATGTTTACAGCTTTGGAGTGGTTATGTTAGAACTTTTGACAGGCCGTCAGTCCTACGACAGAACACGTGCTCGAGGGGAGCAGTTTCTGGTGAGGTGGGCTATTCCACAACTGCATGACATTGATGCATTATCAAAGATGGTCGATCCTTCTCTAAAAGGAGATTACCCTGCCAAATCATTGTCAAATTTTGCAGACATTATTTCTAGATGTGTTCAGTCGGAGCCAGAATTTAGGCCAGCAATGTCAGAAGTGGTCTTGTACTTAATAAATATGATCAGGAAGGAATCTCAACAAAGTGAATCAAATGAATAA 2424 0.422 MVRRLLSRESSEQKINIELGRTGEERSGSQYKRVKIHGEVLLGFLLICIVQFSHADTDPSDVAAINNLYTALGNPVLPGWVPSGGDPCGQAWQGVRCNGSVIQEITLNGANLGGELGDGLGSFVSIRAIVLNNNHIGGSIPSSLPVTLQHFFLSDNQFTGGIPASLSTLTELSDMSLNNNLLTGEIPDAFQSLTQLINLDLSNNNLSGELPPSMENLSALTSVHLQNNNLSGTLDVLQDLPLQDLNVENNQFVGPIPPKLLSIPNFRNDGNPFNLNVNATIAPARPPHSPVTVSPSGTVVSGTPSSGRLPTKPTDGPTVANESNSVKSKKNTKRVVWISISGILMFVIVVLGLLLFVPRCRSSRREKVNKSSKQHQVGTYGGERHNPREYEDSVQPPSQTEKVPKGAVVRLKRDHQEEARRVRAIPKLQGEKEKDEQRMGTLPKLLDHEMDMSSLGVYSMPSPPPPPPPPPLTTESVLVEPTSFRKGANFNPPKRSPVPPTFAKTFTIASLQQYTNSFSQDNLIGLGMLGTVYKAELPDGKILAVKKLDKRVSDHQTDDEFLDLINNIDRIRHANIVELIGYCAEHGQRLLIYEYCSNGSLQDALHSDDEFKTRLSWNARIRIALGAARALEYLHEQCAPPVVHRNFKSANILLDDDVSVRLSDCGLAPLITKGYVSQFSGQLLAAYGYGAPEFESGIYTYQSDVYSFGVVMLELLTGRQSYDRTRARGEQFLVRWAIPQLHDIDALSKMVDPSLKGDYPAKSLSNFADIISRCVQSEPEFRPAMSEVVLYLINMIRKESQQSESNE* 808
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g1107 807 Gene3D Transferase(Phosphotransferase) domain 1 596 807 - -
Pvu5g1107 807 MobiDBLite consensus disorder prediction 286 327 - -
Pvu5g1107 807 Pfam Leucine rich repeat 171 230 IPR001611 GO:0005515
Pvu5g1107 807 ProSiteProfiles Protein kinase domain profile. 518 792 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu5g1107 807 MobiDBLite consensus disorder prediction 291 327 - -
Pvu5g1107 807 Pfam Protein tyrosine and serine/threonine kinase 521 790 IPR001245 GO:0004672|GO:0006468
Pvu5g1107 807 SUPERFAMILY Protein kinase-like (PK-like) 492 792 IPR011009 -
Pvu5g1107 807 MobiDBLite consensus disorder prediction 364 405 - -
Pvu5g1107 807 SUPERFAMILY L domain-like 57 265 - -
Pvu5g1107 807 PANTHER OS01G0253100 PROTEIN 48 807 IPR045271 GO:0004714|GO:0006468
Pvu5g1107 807 Pfam Leucine rich repeat N-terminal domain 59 98 IPR013210 -
Pvu5g1107 807 Gene3D Phosphorylase Kinase; domain 1 493 595 - -
Pvu5g1107 807 Gene3D Ribonuclease Inhibitor 58 281 IPR032675 -
Pvu5g1107 807 PANTHER PROTEIN STRUBBELIG-RECEPTOR FAMILY 1-RELATED 48 807 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g1107 Pvu-Chr5 31430964 31437424 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu5g1107 47 803 Strubbelig Receptor Gene Family AT4G03390 61.198 0.0 868
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Pvu5g1107 PK_Tyr_Ser-Thr 4.5e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g1107 - - gmx:100811490 1293.49
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g1107 5 31430964 31437424 Pvu11g1159 11 14804214 14815268 PCT