Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g1100 ATGGGCTGTTGTGTTTCAACAAGTAGTCAGAGTACTCGTACTACCAGGAGCACTGGAGACACAAACGTTCCGACGTGTCTAGAAATAGGATTCTGTGGTCAAAAGAGTGTGAGGAGAACATCCTCTGATCATGTGGTCTATCTGCACCAATTACCATCCTTACCCAACAGAATTTTCACCAATGGAAAGAGCAGATCTTCTTGCATATTTACACAGCAGGGTCGTAAGGGTATTAATCAGGACGCCATGATTGTATGGGAAGATTTCATTTCGGAAGATGTGACCTTTTGTGGTGTCTTTGATGGCCATGGTCCACACGGTCACCTTGTTGCACGCAAAGTCCGGGAAGCCTTGCCACTCAAACTGCTTTCATTTTTGCATTCCTCCGAATCAGGGCAAAATGGTTCAGGTAAAACTTGTTTCAGAGGCAGCATGAAGCCTGAAAATGGAGAGTCTGAGAAAGATGTTACTGCTGAAGATAAACTGAGTTCTATGTGGAGAGAAGCTTTCATGAAGGCATACAAGGCTATGGATAAAGAGCTGAGGTCTCATCCAAATTTGGACTGCTTTTGTAGTGGGAGCACAGCTGTCACTGTAGTGAAACAGGGTTCAAATTTATTCATGGGCAATATTGGGGATTCCCGAGCAATCATGGGATCCAAGGACAGCAATGACGTCATGGTGGCAATTCAGTTGACCATTGATTTGAAGCCTGATTTGCCAAGAGAAGCAGAAAGAATCAAACGATGCAAGGGTAGGGTGTTTGCATTACAAGATGAGCCAGAAGTTCATAGGGTATGGTTGCCTTTTGATGATGCACCAGGATTAGCAATGGCTCGAGCATTTGGCGATTTTTGCTTGAAGGAATACGGTGTGATTTCTATACCTGATTTTTCTCATCGGTTACTAACAGACAAAGATCAGTTCATTGTTCTTGCCTCGGATGGGATCTGGGATGTCTTAAGCAATGAAGAGGTGGTTGGGATAGTATCTTCAGCACCAACTCGATCATCAGCAGCAAGGCTTCTGGTGGATTCGGCGGCTCGAGAGTGGAAACTTAAATATCCTACTTCAAAAGTGGATGACTGTGCTGTTGTGTGCCTATTTCTGGATGGAAAAATGGATTCAGAATCTGATTGTGATGAGCAATGCTTCTCTTCTGCTATCATCCCGAGCAACCATTCAGTTAATCTGGTTGAGACAGATGATGGTCAAAAGTCTGAGCCAACTTTGCAAAGGAACTTTACTGTGAGATCCTCAGAAGAACATGGCCCCTACGGAGGAAGAGGAGGAGTATCTGTTGATGTTGTTGAAGATGGAACATCAGGGCCTGAAGATCAAAACTGGTTAGGTTTGGAGGGTGTGACACGAGTAAATTCACTGGTTCAACTTCCTAGATTTTCTGAGGAAAAGCCAAACTGTTGA 1425 0.4414 MGCCVSTSSQSTRTTRSTGDTNVPTCLEIGFCGQKSVRRTSSDHVVYLHQLPSLPNRIFTNGKSRSSCIFTQQGRKGINQDAMIVWEDFISEDVTFCGVFDGHGPHGHLVARKVREALPLKLLSFLHSSESGQNGSGKTCFRGSMKPENGESEKDVTAEDKLSSMWREAFMKAYKAMDKELRSHPNLDCFCSGSTAVTVVKQGSNLFMGNIGDSRAIMGSKDSNDVMVAIQLTIDLKPDLPREAERIKRCKGRVFALQDEPEVHRVWLPFDDAPGLAMARAFGDFCLKEYGVISIPDFSHRLLTDKDQFIVLASDGIWDVLSNEEVVGIVSSAPTRSSAARLLVDSAAREWKLKYPTSKVDDCAVVCLFLDGKMDSESDCDEQCFSSAIIPSNHSVNLVETDDGQKSEPTLQRNFTVRSSEEHGPYGGRGGVSVDVVEDGTSGPEDQNWLGLEGVTRVNSLVQLPRFSEEKPNC* 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g1100 474 SUPERFAMILY PP2C-like 57 372 IPR036457 -
Pvu5g1100 474 MobiDBLite consensus disorder prediction 1 20 - -
Pvu5g1100 474 CDD PP2Cc 65 370 IPR001932 -
Pvu5g1100 474 PANTHER PROTEIN PHOSPHATASE 2C 52-RELATED 1 462 - -
Pvu5g1100 474 SMART PP2C_4 55 368 IPR001932 -
Pvu5g1100 474 ProSiteProfiles PPM-type phosphatase domain profile. 66 370 IPR001932 -
Pvu5g1100 474 Pfam Protein phosphatase 2C 92 347 IPR001932 -
Pvu5g1100 474 MobiDBLite consensus disorder prediction 134 158 - -
Pvu5g1100 474 Gene3D - 58 378 IPR036457 -
Pvu5g1100 474 PANTHER ALPHABET, ISOFORM E-RELATED 1 462 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g1100 Pvu-Chr5 31314803 31319286 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu5g1100 1 472 PP2C-type Phosphatase Gene Family AT1G03590 68.697 0.0 626
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g1100 - - gmx:100777448 841.647
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g1100 5 31314803 31319286 Pvu5g1100 5 31314803 31319286 ECH
Pvu5g1100 5 31314803 31319286 Pvu11g1165 11 15078978 15083189 PCT