Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g1091 ATGGCTGCAGCGAACACTGGGAAATTCGATATGGGAGATGAAACTAACAATTGTTCCCAGAAGGGAAGTGAAGGCAAAGATTGGGAGGTTGAAAAGGGAAAGGGCATGGGTTCAACCACTCAGAGGCGTCAATGGAAGCCAGTTTTTGATGATACTTCCATTTCACACAATAGACCTCTGAAGAAAATCCGCAGCCCCGATCGCCATAACACAAACCAATCTTCCTCCTCTTCTTCTTCTTCTGCCCCTTTTCAACCTTCTCCTCTCTCTACCCCTCCTTCATCCTCTTCGAGAATCGTGTTCCCTTTCGCCTTCAACGGTTCCCAACACCCAATGCAATTCCCTCACCAATTCGGCGCCACAAATTCACCTTTCCCTCACCCCTCTTTCCAAAACCAGCAACAACAGATGATATCATTCGATTCCCAACAACAAAACCTTCCCTTTCCACCAATCATGGCCAGAGATTCTTCTCTTCCACACTACCACCATCATCAACAGCATCCGCAGCAACTTCTTCAGTATTGGAGCGACGCTCTGCATCTAAGTCCCAGAGGAATGTTAACCCACTTGGGGCCAGATGGAAGGCCGTTGTTTAGGCCTCCAACGCAGCCCCTAAACGCCACCAAGCTCTACAGAGGAGTGAGGCAACGCCATTGGGGAAAATGGGTCGCTGAAATTCGTCTTCCTCGAAACAGAACGCGTCTCTGGCTAGGTACATTCGACACGGCGGAGGACGCCGCCATGGCCTACGACCGCGAAGCCTTCAAACTCCGAGGAGAAAATGCCAGGCTCAATTTCCCCGAACTGTTCCTCAACAAGGACAAAAACAAACAAGTTGAAGAAGAACCTTCTTCACCTGCTCAAAACCAGCCTGAACTTGAACCTGTTCCTGTAGGTCGTGACATGCCAAGAGAAGAGTCTAATGAGAATGACTCGGGAATTGGATCGAGTGACGCCACTGATGAGGTTCATGCTGCTGCTGCAGAAGGAGGTGAAGGGGTTTCTCAGGAGCTTGTTTGGGGAGAAATGTCTGCATGGTTCAATGCTATTCCTGCAGCTTGGGGACCTGGTAGCCCTGTGTGGGATGATTTGGATTCCACCAATAATCTTCTTTACCAATCTCACGTTCCTTTTTCAAATTCCAATCAGCAGGAGATCAATGATGCTCAGAGACATGAACATAACATGGGACCAGGTTACTTATGGAAGGATCAGGATTGA 1224 0.4877 MAAANTGKFDMGDETNNCSQKGSEGKDWEVEKGKGMGSTTQRRQWKPVFDDTSISHNRPLKKIRSPDRHNTNQSSSSSSSSAPFQPSPLSTPPSSSSRIVFPFAFNGSQHPMQFPHQFGATNSPFPHPSFQNQQQQMISFDSQQQNLPFPPIMARDSSLPHYHHHQQHPQQLLQYWSDALHLSPRGMLTHLGPDGRPLFRPPTQPLNATKLYRGVRQRHWGKWVAEIRLPRNRTRLWLGTFDTAEDAAMAYDREAFKLRGENARLNFPELFLNKDKNKQVEEEPSSPAQNQPELEPVPVGRDMPREESNENDSGIGSSDATDEVHAAAAEGGEGVSQELVWGEMSAWFNAIPAAWGPGSPVWDDLDSTNNLLYQSHVPFSNSNQQEINDAQRHEHNMGPGYLWKDQD* 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g1091 407 CDD AP2 210 270 IPR001471 GO:0003700|GO:0006355
Pvu5g1091 407 MobiDBLite consensus disorder prediction 37 51 - -
Pvu5g1091 407 PRINTS Ethylene responsive element binding protein signature 212 223 IPR001471 GO:0003700|GO:0006355
Pvu5g1091 407 PRINTS Ethylene responsive element binding protein signature 234 250 IPR001471 GO:0003700|GO:0006355
Pvu5g1091 407 ProSiteProfiles AP2/ERF domain profile. 211 268 IPR001471 GO:0003700|GO:0006355
Pvu5g1091 407 SMART rav1_2 211 274 IPR001471 GO:0003700|GO:0006355
Pvu5g1091 407 Pfam AP2 domain 212 260 IPR001471 GO:0003700|GO:0006355
Pvu5g1091 407 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF053 1 390 - -
Pvu5g1091 407 MobiDBLite consensus disorder prediction 277 319 - -
Pvu5g1091 407 MobiDBLite consensus disorder prediction 1 95 - -
Pvu5g1091 407 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF061 1 390 - -
Pvu5g1091 407 MobiDBLite consensus disorder prediction 69 95 - -
Pvu5g1091 407 Gene3D AP2/ERF domain 211 269 IPR036955 GO:0003700|GO:0006355
Pvu5g1091 407 SUPERFAMILY DNA-binding domain 211 269 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g1091 Pvu-Chr5 31203406 31204629 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu5g1091 51 381 AP2-EREBP Transcription Factor Family AT2G20880 45.536 1.75e-64 208
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Pvu5g1091 AP2 2.6e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g1091 - - gmx:100809887 599.742
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g1091 5 31203406 31204629 Pvu5g1091 5 31203406 31204629 ECH