Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g1074 ATGTCAAAGAGAAATGATAATAAAGGAAAGATAATCGTCATTGGTATCTCAACCATATTCTTGGTGGCTATAATTGGGGTTGTCATATTTGGTATCAACCTTATTAATAATGGTTCAAATGCAAGGGCTGCAAACACCACAAATCTAAAAGAACTTATAAAAATTGCCTTCAATATCACCATTACAAAAATTGGTGATAAACTCAAAGAAGTTAATCTCTTGCATGATGTTGAGAAAGATCCTAGAGCCAAGATGGCACTTGACACATGCAAACAACTCATGGATTTTTCAATTGGGATTTGGCTCAATGGAGCAATTACTTACCAAGACACTTGCTTGGATGGGTTTGAGAACACCACTAGTGAAGCTGGTAAAAAGTTGAAGGATTTATTAATGATAGGCATGCATAAGAGTAGTAATGCTCTTGCCATTGTAATTGAATTGACTGATTCTATTACAAATTGGAATGCCACAAAGTTACTCGGACGTCGCCTCCTTCAAGGTTCTAAGTCACCTTCATGGGTTGATCAGTCTTGGTGTCTATTTAATCACAAGCCTAATGTGACGGTAGCAAAAGATGGTAAGGGAGATTTCAAAAGCATCAATGAAGCACTAAAGCGAGTTCATGAGAAAAAAAAAAAATATGTTGAAGTTACAAAGGAGATGACTCATGTGGTTTTCATTGGTGATGGTGGTAAAAAAACACGAATAACAAGCAACAAAAACTATATTGATGGAATCAACACTTATAGAACTGCGACTGTTGCTATTCAAGGAAATTACTTTGTGGCCATCAACATAGGATTTGAGAATTTTGTTGGACCTGAAAAGCATCAAGCAGTGGCATTGAGAGTCCAAGCAGACAAGTCTATCTTCTATAATTGCTCAATGGATGGATATCAAGACACACTTTATGTACACATAATGCGTCAATTCTACAAGATTGCTCCATTTCAGGGGGGGTCCATTGTGTCTGACCCTGAGTTTTATTTAGTAAGATTTGATAATAAAGCTTACATAGCTCGTCCATGGAAGAATGACTCCAGGATCATTATCATGGACACTTACATTGATGACTTGATTCATACTAATGGGTATTTTCCATGGTATGGATTAGAAGGCCCTTCTGGTATGGATACTTGCTTTTATGCAGAGTATCACAATAGTGGCATCGGTTCAAACAAATCCAAGTGTGTGAATTGGTCTGGGATTTGGAATCTCAATTCAAAAGATGCACATTGGTTCTCTCCTTCCAAGTTCTTTCATGGAACTGATTGGATTCAGGTTACTAGGATTCCTTGCTTCCTTAGCATCCCCACACACCATAAACACAAGAAGACGATACTTAACTGGTGA 1356 0.3746 MSKRNDNKGKIIVIGISTIFLVAIIGVVIFGINLINNGSNARAANTTNLKELIKIAFNITITKIGDKLKEVNLLHDVEKDPRAKMALDTCKQLMDFSIGIWLNGAITYQDTCLDGFENTTSEAGKKLKDLLMIGMHKSSNALAIVIELTDSITNWNATKLLGRRLLQGSKSPSWVDQSWCLFNHKPNVTVAKDGKGDFKSINEALKRVHEKKKKYVEVTKEMTHVVFIGDGGKKTRITSNKNYIDGINTYRTATVAIQGNYFVAINIGFENFVGPEKHQAVALRVQADKSIFYNCSMDGYQDTLYVHIMRQFYKIAPFQGGSIVSDPEFYLVRFDNKAYIARPWKNDSRIIIMDTYIDDLIHTNGYFPWYGLEGPSGMDTCFYAEYHNSGIGSNKSKCVNWSGIWNLNSKDAHWFSPSKFFHGTDWIQVTRIPCFLSIPTHHKHKKTILNW* 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g1074 451 Pfam Pectinesterase 187 319 IPR000070 GO:0030599|GO:0042545
Pvu5g1074 451 Pfam Pectinesterase 320 423 IPR000070 GO:0030599|GO:0042545
Pvu5g1074 451 Gene3D - 319 439 IPR012334 -
Pvu5g1074 451 Gene3D - 181 318 IPR012334 -
Pvu5g1074 451 PANTHER PECTINESTERASE 98 314 - -
Pvu5g1074 451 PANTHER PECTINESTERASE 40 99 - -
Pvu5g1074 451 PANTHER PECTINESTERASE 318 435 - -
Pvu5g1074 451 SMART PMEI_2 30 144 IPR006501 GO:0004857
Pvu5g1074 451 CDD PMEI-like_4 12 159 - -
Pvu5g1074 451 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 44 145 IPR035513 -
Pvu5g1074 451 Gene3D Invertase/pectin methylesterase inhibitor family protein 32 98 IPR035513 -
Pvu5g1074 451 Gene3D Invertase/pectin methylesterase inhibitor family protein 99 149 IPR035513 -
Pvu5g1074 451 Coils Coil 201 221 - -
Pvu5g1074 451 PANTHER PECTINESTERASE 318 435 - -
Pvu5g1074 451 PANTHER PECTINESTERASE 98 314 - -
Pvu5g1074 451 PANTHER PECTINESTERASE 40 99 - -
Pvu5g1074 451 Pfam Plant invertase/pectin methylesterase inhibitor 40 144 IPR006501 GO:0004857
Pvu5g1074 451 SUPERFAMILY Pectin lyase-like 185 434 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g1074 Pvu-Chr5 30936231 30940181 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu5g1074 2 433 Carbohydrate Esterase AT3G05610 36.315 1.35e-114 349
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g1074 K01051 - gmx:100820556 649.818