Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g1073 ATGGGGTGCATAGCTTCCAAGAGTGCTGCTGTTGATGACAGCAGGGAGGGTGTGGCAAGGGAATTGACTTCATCTAGCAGAAGGGCATCTGAGATGAAGGTTTCTGCATTGAGTTCCAAGAAAAGGGTCGATGGAGTTTGGGGCAAAGATAAGGTTTTAGATGGTGCTGATATGAAAGTGTCATTAATTGGCAAGGAATCTGTTGGTTCGATGCGGTTGTTTGATTCTCAGAATGGGAAGAAGAAAAAGGAGAAACCTGAATCGGCTGCTCTTGATCATCCCGGTCTTGGAAGGGTTCCTAAGGGTTTAGAAGGAGAGCAAGTTGCAGCAGGTTGGCCAACTTGGCTTTCTTCTGTTGCTGGTGAAGCTATCCAAGGGTGGATACCACGAAGGGCAGATACTTTTGAGAGGTTTGGTAAAATTGGCCAAGGAACCTACAGTTCTGTGTACAAGGCACGTGATTTGACTCACCAAAAGATCGTTGCATTGAAGAGGGTACGCTTTGATAATTTTGACGCTGAGAGTGTCAAGTTTATGGCAAGGGAAATCCTTGTTCTGCGTAGGCTTGACCATCCAAATATAATAAAGTTGGAAGGATTGATAACGTCGCAGACATCTCGCAGCCTGTACCTTGTTTTTGAATACATGGAACATGATCTTACAGGACTTGCATCAAGTCCTAGCATTAAGTTTTCTGAACCACAGGTTAAGTGTTACATGCAGCAGCTTCTCAGTGGATTGAATCATTGTCATAGTCGAGGTGTCCTCCACCGTGACATAAAGGGCTCAAATCTTCTCATTGACAATAATGGCACCTTAAAGATTGCAGATTTTGGTTTGGCAAATTTTATTGACCCCCATCACAAGGTTCCATTGACCAGCCGTGTAGTAACTTTGTGGTATAGACCACCAGAACTCTTACTCGGAGCATCTAATTACGGAGTTGCAGTAGATTTGTGGAGCACTGGTTGCATACTGGGGGAATTATATTGTGGCAGGCCTATTTTGCCTGGAAAAACAGAGGTTGAGCAATTGCATAGGATTTTTAAACTTTGTGGCTCACCATCTGAGGACTATTGGCGTAAGCTGCGGTCACCACATTCAACAGTATTCAGGCCTCCCCACCATTATAGACGTTGTATTGCTGAAACATTTAAAGACTATCCATCTGCTGTCACAAGGCTCATCGAGTCCCTACTTGCTTTAGATCCCACACTTCGAGGAACAGCGGCTACAGCCCTGAAGAGTGAGTTCTTTTCAATGGAACCCCTTCCTTGCGATCCATCTAGTTTACCAAAATATCCTCCCTGCAAAGAGATTGACACTAAATTGTGGGAAGAAGCAACAAGGCAAGGAGCTGATGGGAGAAAGGAGAAGAAAAATGGACCAAGAGTTCGACAAGAGAAAGAACCTCAGACATTTATTTTATCCAAAGACAATGAGGGCCCTCACATATCAATGCAGCAAGGGCAACGCCTCCCAAACTCAAGGAGCCAGAACGAATTCTTCAACCCTCACAGGGAACCTGTTTCTGGACATTTGGTTTTTCCACAGAAACCATCAGAGGATTATAAAGCAACAGTAAATTATTTCTCGGGGCCTCTTTATCAGAGGCCTATGCATTCAGGTCCATTGGTTCCAGGCAATGGCTGGGAAATGGCTGGAAAGGAAGGTGGTGAGCAGCCTCATGTTTCAAACAAAGTCAACCTACCAAAACTATCTGGAGTGGCATCTAGGACTTCATTGTCTGGAGACAAAAAGGAAAACCATGTTTCTTCGAGGCCCCAAGAAGCAATTCAAGCACAAAGATCTTTGGAGTCAACTAATGTTGGATCAGATTCAAGAAGAAGGCATGATAAAAAACGCCATTCTCACAGAATTGATCCCAGGCAAATCGAAAACGCCAAAGTCTCAACTCAAACACAAATTCTGGAGGGGCATGGACCCATGGGAAACAATATCGGCCACCTCTCTGGTCCATTACTGGTTTCATCAAACAATATGGATCAGATGCTCAAAGAGCGTGATCGAAAGATCCAAGAATATTCGAGACGAGCAAGAATGTACAAGTCAGGTGAGATAGCTCGTGCAAACCAAAATTAG 2103 0.4432 MGCIASKSAAVDDSREGVARELTSSSRRASEMKVSALSSKKRVDGVWGKDKVLDGADMKVSLIGKESVGSMRLFDSQNGKKKKEKPESAALDHPGLGRVPKGLEGEQVAAGWPTWLSSVAGEAIQGWIPRRADTFERFGKIGQGTYSSVYKARDLTHQKIVALKRVRFDNFDAESVKFMAREILVLRRLDHPNIIKLEGLITSQTSRSLYLVFEYMEHDLTGLASSPSIKFSEPQVKCYMQQLLSGLNHCHSRGVLHRDIKGSNLLIDNNGTLKIADFGLANFIDPHHKVPLTSRVVTLWYRPPELLLGASNYGVAVDLWSTGCILGELYCGRPILPGKTEVEQLHRIFKLCGSPSEDYWRKLRSPHSTVFRPPHHYRRCIAETFKDYPSAVTRLIESLLALDPTLRGTAATALKSEFFSMEPLPCDPSSLPKYPPCKEIDTKLWEEATRQGADGRKEKKNGPRVRQEKEPQTFILSKDNEGPHISMQQGQRLPNSRSQNEFFNPHREPVSGHLVFPQKPSEDYKATVNYFSGPLYQRPMHSGPLVPGNGWEMAGKEGGEQPHVSNKVNLPKLSGVASRTSLSGDKKENHVSSRPQEAIQAQRSLESTNVGSDSRRRHDKKRHSHRIDPRQIENAKVSTQTQILEGHGPMGNNIGHLSGPLLVSSNNMDQMLKERDRKIQEYSRRARMYKSGEIARANQN* 701
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g1073 700 MobiDBLite consensus disorder prediction 448 475 - -
Pvu5g1073 700 ProSitePatterns Serine/Threonine protein kinases active-site signature. 255 267 IPR008271 GO:0004672|GO:0006468
Pvu5g1073 700 PANTHER CYCLIN-DEPENDENT KINASE 1 689 - -
Pvu5g1073 700 MobiDBLite consensus disorder prediction 76 91 - -
Pvu5g1073 700 MobiDBLite consensus disorder prediction 482 497 - -
Pvu5g1073 700 Gene3D Transferase(Phosphotransferase) domain 1 218 458 - -
Pvu5g1073 700 ProSitePatterns Protein kinases ATP-binding region signature. 141 164 IPR017441 GO:0005524
Pvu5g1073 700 SUPERFAMILY Protein kinase-like (PK-like) 128 426 IPR011009 -
Pvu5g1073 700 MobiDBLite consensus disorder prediction 594 609 - -
Pvu5g1073 700 Gene3D Phosphorylase Kinase; domain 1 122 217 - -
Pvu5g1073 700 SMART serkin_6 135 419 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu5g1073 700 MobiDBLite consensus disorder prediction 1 33 - -
Pvu5g1073 700 ProSiteProfiles Protein kinase domain profile. 135 419 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu5g1073 700 MobiDBLite consensus disorder prediction 73 97 - -
Pvu5g1073 700 MobiDBLite consensus disorder prediction 448 497 - -
Pvu5g1073 700 MobiDBLite consensus disorder prediction 553 629 - -
Pvu5g1073 700 CDD STKc_CDK9_like 135 419 - -
Pvu5g1073 700 PANTHER CELL DIVISION PROTEIN KINASE 1 689 - -
Pvu5g1073 700 MobiDBLite consensus disorder prediction 567 582 - -
Pvu5g1073 700 Pfam Protein kinase domain 135 419 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g1073 Pvu-Chr5 30925198 30931078 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu5g1073 127 460 Core Cell Cycle Gene Families AT5G10270 48.286 2.43e-109 339
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Pvu5g1073 Pkinase 3.3e-69 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g1073 - K08819 gmx:100781209 1202.96
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g1073 5 30925198 30931078 Pvu11g1226 11 19589531 19595530 PCT