Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g1072 ATGTCTCCACTGAAGCTTCTTCTCATTCTTCTTCACATTGCAACCACTTTGAGCTCAGTTTCCACTACGGAATTTGTCTATAACACAAACTTCAACTCCACAAACATCATCCTATATGGAAATGCCTCTATACAGACCTCCATTCTGACTCTCACAGATTCGAGTTTCTTTTCCATAGGCCGTGCTTTTTACCCTCACAAAATACCTACCAGAAAAGCCAACTCTCCCACTTTGCTCCCCTTTGCAACCTCCTTCATTTTCTCTATTGCTCCCATTAAAAACCTTATCACTGGCCATGGCTTTGTCTTCCTATTCACACCATCAAGAGGTGTAAATGGTACGACTTCAGCTGAGTATATCGGTCTTTTCAATCTTAGCAATGAGGGCAATCCTCAGAACCATGTTTTTGGAGTTGAGTTTGATATAGTTAGAAATGTAGAAGAGTTCAATGATATTAGTGATAACCATGTCGGTGTTGACATAAACTCGCTTCGCTCCTTAACTTCTCATGAAGCTGGCAATTGGGGAGGAAAAGGTGACAAAGAATTTAAGGTGCTGGACCTAAAAAATGGAGAAAACTATCAGGTGTGGATTGAATTTATGAACTCCCAACTTAACGTTACTTTAACTCGGGCAGGACGAAAGAAGCCTAGAGTGCCTCTTATCAGTAGTAATGTTAACCTTTCAGGGGTTCTTATGGATGAAACATATGTTGGATTCACTGCAGCAACAGGGAAGTTAGTAGACAGTACCAGGATTCTTGCTTGGAGTTTTAGTAATTCAAATTTTTCAATAGGTGAAGCTTTGGTGACAGAAGGTTTGCCTTCATTTGTACATCATAAAAGGTGGTTTTTTGAAGGGCGAGTTTTGGCTCTAGGTGTGAGCATGATTTTGTGTGTGTTAATCATTGGCTGTAGTTATGTAGTATTTTCCATTCTGCGCAGAAGCAAGACACAAGAAGAAGTTGAGGACTGGGAACTGGAGTATTGGCCACATAGGATTAGTTTCCATGATATTTATGCAGCAACAAGAGGGTTCTCTGAAGAGAATGTGGTTGCTGTTGGAGGGAACGGGAAGGTGTATAAAGGGGTTTTGCATGGAGCAGAAGTTGCAGTGAAGAGAATCCCTCAAGAAAGGGAAGAAGGGATGAGAGAGTTTTTGGCTGAGGTTTCAATTCTAGGCAGAATGAAGCACAAAAATTTAGTAGGATTGAGAGGTTGGTGCAAAAAAGAGAGGGGAAATTTGATTCTAGTTTATGACTTCATGAGCAAGGGAAGTTTAGACAACAGGATATTTGAGTGTGAAGAGAGCATGGTGCTGACATGGGAAGAGAGGATTCAAGTCTTGAAAAATGTAGCCACAGGGATTCTATACCTGCACGAAGGTTGGGAAGTTAAGGTCTTGCATAGGGACATTAAAGCATGCAATGTTCTTCTTGACAAGGACATGAATGCAAGGCTGGGAGATTTTGGATTGGCTCGTATGCATGATCATCATGGACAAGTTGCCAACACAACAAGAGTGATTGGGACAATAGGATACATTGCCCCTGAAGTGATTCGAACAGGAACAGTATCAACTATGTCTGATGTGTTTAGTTTTGGAATATTGGTATTGGAAGTAATTTGCGGGCGAAGATCAATTGAAGAACATAAACCAGGTCTTATTGATTGGTTGATGTCTTTAATGGTGCAAGGCCAATTGCACAGTGCTGTTGATGAAAGGTTGAAGGCTAAATGGGGATACAACACAGAGGAAGCTGAAAGATTGCTTCATTTGGGTTTGTTGTGTTCACATTCAGACCCTAGCATTAGACCAACAATGAGGCAGGTTGTGAAAATGCTGGAGGGGGAAATGGACATCACTGATGAAGAAAACATGGAGACGAGTTTGCTTGGAAAAGTAAAATCAGCTGCAATGTGGTCTAAAACCGAATGTGCTTTTCCATGCAGTGGTTACCCAACTTTTGATGAAATTAAGATGTTCAGTTTTAATTCTTGGACCTCTGGAAGAGGCTCAAGTACTTTTCCAGGATCAGAATCAGAGATCATCAAAGTAAACAGATGA 2067 0.4098 MSPLKLLLILLHIATTLSSVSTTEFVYNTNFNSTNIILYGNASIQTSILTLTDSSFFSIGRAFYPHKIPTRKANSPTLLPFATSFIFSIAPIKNLITGHGFVFLFTPSRGVNGTTSAEYIGLFNLSNEGNPQNHVFGVEFDIVRNVEEFNDISDNHVGVDINSLRSLTSHEAGNWGGKGDKEFKVLDLKNGENYQVWIEFMNSQLNVTLTRAGRKKPRVPLISSNVNLSGVLMDETYVGFTAATGKLVDSTRILAWSFSNSNFSIGEALVTEGLPSFVHHKRWFFEGRVLALGVSMILCVLIIGCSYVVFSILRRSKTQEEVEDWELEYWPHRISFHDIYAATRGFSEENVVAVGGNGKVYKGVLHGAEVAVKRIPQEREEGMREFLAEVSILGRMKHKNLVGLRGWCKKERGNLILVYDFMSKGSLDNRIFECEESMVLTWEERIQVLKNVATGILYLHEGWEVKVLHRDIKACNVLLDKDMNARLGDFGLARMHDHHGQVANTTRVIGTIGYIAPEVIRTGTVSTMSDVFSFGILVLEVICGRRSIEEHKPGLIDWLMSLMVQGQLHSAVDERLKAKWGYNTEEAERLLHLGLLCSHSDPSIRPTMRQVVKMLEGEMDITDEENMETSLLGKVKSAAMWSKTECAFPCSGYPTFDEIKMFSFNSWTSGRGSSTFPGSESEIIKVNR* 689
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g1072 688 CDD STKc_IRAK 355 617 - -
Pvu5g1072 688 CDD lectin_legume_LecRK_Arcelin_ConA 23 261 IPR001220 GO:0030246
Pvu5g1072 688 PANTHER - 1 675 - -
Pvu5g1072 688 ProSitePatterns Serine/Threonine protein kinases active-site signature. 467 479 IPR008271 GO:0004672|GO:0006468
Pvu5g1072 688 PANTHER LECTIN RECEPTOR KINASE 1 675 - -
Pvu5g1072 688 Gene3D - 21 266 - -
Pvu5g1072 688 SMART serkin_6 346 615 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu5g1072 688 Gene3D Transferase(Phosphotransferase) domain 1 422 637 - -
Pvu5g1072 688 SUPERFAMILY Concanavalin A-like lectins/glucanases 23 261 IPR013320 -
Pvu5g1072 688 Gene3D Phosphorylase Kinase; domain 1 307 421 - -
Pvu5g1072 688 ProSiteProfiles Protein kinase domain profile. 346 619 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu5g1072 688 SUPERFAMILY Protein kinase-like (PK-like) 321 616 IPR011009 -
Pvu5g1072 688 Pfam Protein kinase domain 350 613 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu5g1072 688 Pfam Legume lectin domain 23 262 IPR001220 GO:0030246
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g1072 Pvu-Chr5 30915535 30917601 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu5g1072 20 563 Receptor kinase-like Gene Family AT4G04960 55.616 0.0 602
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Pvu5g1072 Pkinase 9.7e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g1072 - - gmx:100776006 1160.59
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu11g1227 11 19620326 19621921 Pvu5g1072 5 30915535 30917601 PCT