Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g1044 ATGGGTGTTGATTACTACCAAATCCTTCAGGTCGATAGGAATGCTAAAGAAGAGGACCTGAAGAGATCGTACAAGAGACTGGCCATGAAATGCCACCCGGACAAAAATCCGACAAAGAAGGAAGCCGCTGAATCGATGTTTAAACAAGTGTCTGAAGCCTACGAGGTGTTAAGTGATCCCCGCAAGAGGGCAATTTTTGATAAGTATGGTGAAAATGGTCTTAAAGGTCAGGTGCCACCTGCTGATGCTGGTGCTTCTCATCGTGGTGTTTTTCATGGTGGTGCTTCTCGTGCTGGTGGAGGAGGAACCGCGTTCTATTCCAGTGGGGACTTTCCGGCCTCGGCTTGGTTCAATCCTCGGAGTGCTGATGATGTTTTTGCAGAGTTCTTTGGATGTTCGGACTCTGGTGGGGGCATGAGATCATCGACATTCTCTTTTAGTGAGGAGGCGTTTAGGACTTCCGGGGGCGGCGGCGGAGGAGGAGAGACCCATGCGAGTCGTGGTGGTGGTCCCCTCAAAGCAGCTCCCATTGAGAAGAAGTTGCCCTGTACACTTGAGGAGTTATACAATGGGACCACCAAAAGGATGAAGATATCTCGGGAAATTTTTGAGGCCTCTGGAAGACATATGCAGGTAGAAGAGATATTGACAATCAATGTGAAGGCTGGTTGGAAGAAGGGCACCAAGATCACCTTTATAGAGAAGGGAAATCAACAGCCAAATGTGACACCAGCTGATATTGTTTTCATCATAGATGAAAAAGTTCATGGAGTTTATTCCAGAGATGGAAATGACCTTGTGGTCACCCAGAAGATATCTCTTGTGGAAGCCTTGACAGGCTACATTGTGAACCTGGTCACACTTGATGGAAGAAACTTAACTGTGCCTATCAGCCGAATCATTCATCCTCAATATGAGGAGGTTGTTGAAAGAGAAGGGTTGCCTCTCTCAAGGGATCCAACAAAGAAGGGAAACTTGAGGATAAAGTTCAACATCAGATTCCCATCCAAGCTCACTTTTGACCAGAAGGTTGGAATGAAGAAACTTTTGGGTGCTTGA 1059 0.4674 MGVDYYQILQVDRNAKEEDLKRSYKRLAMKCHPDKNPTKKEAAESMFKQVSEAYEVLSDPRKRAIFDKYGENGLKGQVPPADAGASHRGVFHGGASRAGGGGTAFYSSGDFPASAWFNPRSADDVFAEFFGCSDSGGGMRSSTFSFSEEAFRTSGGGGGGGETHASRGGGPLKAAPIEKKLPCTLEELYNGTTKRMKISREIFEASGRHMQVEEILTINVKAGWKKGTKITFIEKGNQQPNVTPADIVFIIDEKVHGVYSRDGNDLVVTQKISLVEALTGYIVNLVTLDGRNLTVPISRIIHPQYEEVVEREGLPLSRDPTKKGNLRIKFNIRFPSKLTFDQKVGMKKLLGA* 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g1044 352 Gene3D - 176 255 - -
Pvu5g1044 352 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 1 351 - -
Pvu5g1044 352 Gene3D DnaJ domain 3 142 IPR036869 -
Pvu5g1044 352 PRINTS DnaJ domain signature 6 24 IPR001623 -
Pvu5g1044 352 PRINTS DnaJ domain signature 24 39 IPR001623 -
Pvu5g1044 352 PRINTS DnaJ domain signature 42 62 IPR001623 -
Pvu5g1044 352 PRINTS DnaJ domain signature 62 81 IPR001623 -
Pvu5g1044 352 PANTHER DNAJ HOMOLOG SUBFAMILY B MEMBER 13-LIKE 1 351 - -
Pvu5g1044 352 SUPERFAMILY HSP40/DnaJ peptide-binding domain 259 343 IPR008971 GO:0006457|GO:0051082
Pvu5g1044 352 CDD DnaJ 4 59 IPR001623 -
Pvu5g1044 352 Pfam DnaJ domain 4 67 IPR001623 -
Pvu5g1044 352 ProSitePatterns Nt-dnaJ domain signature. 47 66 IPR018253 -
Pvu5g1044 352 Pfam DnaJ C terminal domain 177 335 IPR002939 -
Pvu5g1044 352 ProSiteProfiles dnaJ domain profile. 4 70 IPR001623 -
Pvu5g1044 352 SMART dnaj_3 3 62 IPR001623 -
Pvu5g1044 352 SUPERFAMILY HSP40/DnaJ peptide-binding domain 177 256 IPR008971 GO:0006457|GO:0051082
Pvu5g1044 352 Gene3D - 256 336 - -
Pvu5g1044 352 CDD DnaJ_C 175 338 - -
Pvu5g1044 352 SUPERFAMILY Chaperone J-domain 3 95 IPR036869 -
Pvu5g1044 352 MobiDBLite consensus disorder prediction 151 173 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g1044 Pvu-Chr5 30309869 30313494 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu5g1044 4 67 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 41.176 4.18e-08 52.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g1044 K09510 - pvy:116113367 466.848