Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g1043 ATGTTTCACCATAGCCAGCGACTACTTTTCTTTCTGCTTCTCTTTCTCTCTCTCAAACACACTTTCTCTCTAAACCAAGACGGTCTCTTCCTCCTCCAGGCCAAGCTCCAACTCTCCGACCCCACAAACGCCCTCTCCGATTGGAACCATCGTGACGCCACCCCATGCAACTGGACCGCCGTCACATGCCTCGCCGCCACCGGCGCCGTCACCTCCCTCAACCTCTACAACCTCAATCTCTCCGGCCCCGTCCCCGCCGCCACCCTCTGCCGCCTTCCCTCCCTCGCCAACCTCTCCATGGCCAACAACTACCTTGACAACACCCTTCCCGCCGCCGCGTTCTCCACCTGCGCTGCCCTCCGATACCTCGACCTCTCCCAGAATCTCATCTCCGGCCCCATCCCCGCCGCCCTCGCCTTCCTCCCCGCCCTTGAAACCCTCGACCTCTCATCGAACAACTTCTCGGGCGAGATTCCGACGAGCTTCGGCCAGTTCCGCCAACTCCGAAGCCTCTCCCTCGTCAGCAACCTCCTGAACGGAACCATTCCCTCTTTCCTCGGCAACGTTTCCACGCTCAAAACGCTTCATCTCGCTTACAACGATTTATTCAACGCAGGTCCGATTCCTCCCTCTTTGGGGAACCTAACGAATCTCGAGGTGCTCTGGCTAGCAGGGTGCAAACTTGTGGGCCCCATTCCACTTTCTCTGGGAAACTTGACGAAGCTTACGCACCTTGACTTGTCCATGAACAACCTCGTCGGAAATATACCTGAACAAGTCCTGTCGGGTTTGCGCAGCATTGTACAAATCGAACTCTACGAGAACGCGCTCTCCGGCGCGTTGCCACGCGCCGTGTTCTCTAACCTTACTAACTTGGAACGGTTCGATGCTTCCACGAACGAGTTGACTGGGACGATTCCGGACGAGTTGTGCGGAATGAAGAAACTCGGGTCGCTCAACCTGTTCACTAATAAACTCGAGGGGACTTTGCCGGAGAGTATAGTGAACTCGGAGAACTTGTACGAATTGAAGTTGTTCAACAACTCCCTCGCTGGGTCGTTGCCCAGTGGGTTGGGTGGAAACTCAAAGTTGCAGATTTTCGACGTTTCATATAATCGATTCTCCGGCGAGGTTCCGGCGGGATTGTGCAGCGGGGGAGCGTTGGAGGAGCTGATTCTGATTTACAATTCTTTTTCCGGGAGGATCCCGGACAGTATCGGGGAATGCAAGAGTTTGAGAAGGGTTCGGCTTAGGAACAATAACCTTTCTGGGGTTGTGCCGGAGGGCTTATGGGGTTTGCCCCATTTGTATTTGTTGGAGCTTGTTGAGAACTCTCTTTCTGGGTCGATTTCTAATGGGATTTCCGGAGCGCGGAACTTGTCAATTTTGTTAATTTCGGGAAATAACTTTTCTGGGTCGATTCCTGAGGGTTTTGGTGAATTGGTTAATCTTGAAGAGTTTATGGCGAATAATAATAGTCTTACTGGCCGGATTCCGACAAGTGTGGGTGGGTTGAGTCAGTTGGATAGGCTTGTCCTCAGAGACAATCAGCTTTTTGGAGAGATTCCAGCTGGTGTTGGTGGTTGGAAGAAGCTCAATGAACTTGATTTGGCTAATAATAGATTGGATGGGAGTATTCCTAAGGAGTTATGGGACTTGCCTGTGCTTAATTATCTTGATCTTTCAAGTAATCGGTTATCTGGTGTAATTCCAATTGAGCTGCAGAATTTGAAGCTGAACTTGTTGAATTTGTCGAACAATCAGTTTTCTGGGGAGATTCCTCCTCTTTATGCCAATGAGAATTATAGAAAGAGTTTTCTTGGGAATCCGGGTCTGTGTAGTTCTCTCTCTGGTCTGTGTCCAAGCTTGGAAGAGAATGAGGGTAAGAGCAGGAAATATGTGTGGATTTTCCGGTTCATATTTGTGCTTGCTGGGATTGTGTTAATTGTTGGGGTGTGTTGGTTCTACTTCAAATTCCGGGACTTCAAGAAGATGAAAAAGGGGTTTCACATTTCAAAGTGGAGGTCGTTTCATAAGCTGGGGTTTAGTGAGTTTGAGGTTGTTAAATTGCTAAGTGAGGACAATGTTATAGGAAGTGGAGCATCTGGGAAGGTTTACAAAGTTGCGCTGAGCAATGGTGAGGTGGTGGCTGTGAAGAAATTGTTCGGAACACCTAACATGGGAAATGGATCTGTTGATTCTGAGAAGGATGGATTTGAAGTTGAGGTTGAAACACTGGGTAAGATTCGGCACAAGAATATTGTGAGATTATGGTGTTGCTGCAACAATAAAGATAGCAAGCTCTTGGTTTATGAGTATATGCCAAATGGGAGCCTAGCTGATTTGTTGCATAGTAGCAAGAAAGGCTTGCTGGATTGGCCCACCAGATACAAAATTGCTATCGATGCTGCTGAGGGGCTCTCCTATTTGCATCATGATTGTGTCCCCCCTATTGTTCATAGGGATGTCAAATCTAGCAATATCTTGCTAGATGATGAATTTGGAGCAAAAGTAGCCGATTTTGGAGTTGCCAAAATTGTGAAGGGAGCCAACCAAGGTGCAGAATCCATGTCTGTGATTGCTGGATCTTACGGTTACATTGCACCAGAATATGCTTATACTCTTCGGGTGAATGAAAAGAGTGACATATATAGTTTTGGTGTGGTAATTTTGGAGTTGGTAACTGGGAAGCCCCCTCTTCATCAAGAGTATGGAGAAAAGGATCTAGTGAAATGGGTTTACTCTACATTGGATGAGAAAGGAGTGGAAGAGTTGATTGATCCAAGTTTGGATACAGAATATAGGGAAGAAATGAGGAAGGTACTCAGTGTGGGACTTCTTTGCACTAATTCTCTTCCTATAACCCGTCCTTCAATGCGTAGAGTGGTGAAAATGCTGAAGGAAGTAACTGCACCTGCACTTCCCAAATCCTTAAGTGGAAAACTCTCTCCTTATTTTCAAGAGGCCTCTGATAATGATCTTCAGGGAAGCTTAGTTTGA 3000 0.4777 MFHHSQRLLFFLLLFLSLKHTFSLNQDGLFLLQAKLQLSDPTNALSDWNHRDATPCNWTAVTCLAATGAVTSLNLYNLNLSGPVPAATLCRLPSLANLSMANNYLDNTLPAAAFSTCAALRYLDLSQNLISGPIPAALAFLPALETLDLSSNNFSGEIPTSFGQFRQLRSLSLVSNLLNGTIPSFLGNVSTLKTLHLAYNDLFNAGPIPPSLGNLTNLEVLWLAGCKLVGPIPLSLGNLTKLTHLDLSMNNLVGNIPEQVLSGLRSIVQIELYENALSGALPRAVFSNLTNLERFDASTNELTGTIPDELCGMKKLGSLNLFTNKLEGTLPESIVNSENLYELKLFNNSLAGSLPSGLGGNSKLQIFDVSYNRFSGEVPAGLCSGGALEELILIYNSFSGRIPDSIGECKSLRRVRLRNNNLSGVVPEGLWGLPHLYLLELVENSLSGSISNGISGARNLSILLISGNNFSGSIPEGFGELVNLEEFMANNNSLTGRIPTSVGGLSQLDRLVLRDNQLFGEIPAGVGGWKKLNELDLANNRLDGSIPKELWDLPVLNYLDLSSNRLSGVIPIELQNLKLNLLNLSNNQFSGEIPPLYANENYRKSFLGNPGLCSSLSGLCPSLEENEGKSRKYVWIFRFIFVLAGIVLIVGVCWFYFKFRDFKKMKKGFHISKWRSFHKLGFSEFEVVKLLSEDNVIGSGASGKVYKVALSNGEVVAVKKLFGTPNMGNGSVDSEKDGFEVEVETLGKIRHKNIVRLWCCCNNKDSKLLVYEYMPNGSLADLLHSSKKGLLDWPTRYKIAIDAAEGLSYLHHDCVPPIVHRDVKSSNILLDDEFGAKVADFGVAKIVKGANQGAESMSVIAGSYGYIAPEYAYTLRVNEKSDIYSFGVVILELVTGKPPLHQEYGEKDLVKWVYSTLDEKGVEELIDPSLDTEYREEMRKVLSVGLLCTNSLPITRPSMRRVVKMLKEVTAPALPKSLSGKLSPYFQEASDNDLQGSLV* 1000
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g1043 999 Gene3D Ribonuclease Inhibitor 191 262 IPR032675 -
Pvu5g1043 999 ProSitePatterns Protein kinases ATP-binding region signature. 697 720 IPR017441 GO:0005524
Pvu5g1043 999 ProSiteProfiles Protein kinase domain profile. 691 974 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu5g1043 999 Gene3D Transferase(Phosphotransferase) domain 1 774 976 - -
Pvu5g1043 999 SUPERFAMILY Protein kinase-like (PK-like) 690 966 IPR011009 -
Pvu5g1043 999 SMART serkin_6 691 986 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu5g1043 999 SUPERFAMILY L domain-like 38 380 - -
Pvu5g1043 999 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 7 977 - -
Pvu5g1043 999 PANTHER RECEPTOR-LIKE PROTEIN KINASE HSL1 7 977 - -
Pvu5g1043 999 ProSitePatterns Serine/Threonine protein kinases active-site signature. 818 830 IPR008271 GO:0004672|GO:0006468
Pvu5g1043 999 Pfam Protein kinase domain 693 963 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu5g1043 999 Pfam Leucine rich repeat 93 154 IPR001611 GO:0005515
Pvu5g1043 999 Gene3D Ribonuclease Inhibitor 263 622 IPR032675 -
Pvu5g1043 999 SUPERFAMILY RNI-like 286 596 - -
Pvu5g1043 999 Gene3D Phosphorylase Kinase; domain 1 674 773 - -
Pvu5g1043 999 Pfam Leucine rich repeat N-terminal domain 25 63 IPR013210 -
Pvu5g1043 999 Gene3D Ribonuclease Inhibitor 24 185 IPR032675 -
Pvu5g1043 999 SMART LRR_typ_2 92 116 IPR003591 -
Pvu5g1043 999 SMART LRR_typ_2 553 576 IPR003591 -
Pvu5g1043 999 SMART LRR_typ_2 289 313 IPR003591 -
Pvu5g1043 999 SMART LRR_typ_2 264 288 IPR003591 -
Pvu5g1043 999 SMART LRR_typ_2 505 529 IPR003591 -
Pvu5g1043 999 SMART LRR_typ_2 409 432 IPR003591 -
Pvu5g1043 999 SMART LRR_typ_2 239 263 IPR003591 -
Pvu5g1043 999 SMART LRR_typ_2 141 164 IPR003591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g1043 Pvu-Chr5 30242528 30246075 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu5g1043 21 999 Receptor kinase-like Gene Family AT1G28440 58.894 0.0 1127
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Pvu5g1043 Pkinase 2.7e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g1043 - - gmx:100778128 1522.68