Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pvu5g1040 | ATGACTCAGTGCAGCTACCCTGAAAACAACCATACCATTGTGGAGAGGCACAAAGATAGCTTGATCAGAACATGTCCTACATGTGGACATCATATCAATTGCCAGGAGCAGGCTGCTGGAATTCATGACTTGCCTGGACTTCCTGCTGGAGTGAAGTTTGATCCTACTGATCAGGAGATTCTTGAGCATTTGGAAGCGAAGGTGCGCTCTGATATTCACAAGCTTCATCCGTTAATTGATGAGTTCATCCCTACTCTTGAAGGGGAAAATGGAATCTGCTGTACCCATCCAGAGAAGTTACCAGGAGTTAGCAAAGATGGGTTGATCCGACATTTCTTTCACAGGCCTTCCAAAGCATATACGACTGGAACAAGGAAAAGGAGAAAGGTGCACACAGATGCTGATGGCAGCGAGACAAGGTGGCACAAAACAGGTAAGACTAGGCCAGTCTTCATCAGTGGCAAGTTAAAAGGGTACAAGAAAATTCTTGTGCTTTACACTAACTACAGAAAACAAAGGAAACCTGAGAAGACAAACTGGGTCATGCATCAGTACCATCTTGGCAATAATGAAGAGGAGAAGGAAGGGGAGTTGGTGGTCTCCAAAGTTTTCTATCAAACACAGCCTAGACAATGTGGTTCACTCACGAAAGACTCATATCCTGCAAAACTAAATGGTGAAAGTGTGCACGAGGTAACTAATCATAAAAGCACTGGGTTTGTCGAGTACTACAATAATTCTTTTGTATCCTTTGATCAAGGGGACCAGCATAGGCCTAGCAGTGCACTAGTCAACCATTTCCCTCTCCATGATGGTGCTACATTCATTCCTTGA | 834 | 0.4412 | MTQCSYPENNHTIVERHKDSLIRTCPTCGHHINCQEQAAGIHDLPGLPAGVKFDPTDQEILEHLEAKVRSDIHKLHPLIDEFIPTLEGENGICCTHPEKLPGVSKDGLIRHFFHRPSKAYTTGTRKRRKVHTDADGSETRWHKTGKTRPVFISGKLKGYKKILVLYTNYRKQRKPEKTNWVMHQYHLGNNEEEKEGELVVSKVFYQTQPRQCGSLTKDSYPAKLNGESVHEVTNHKSTGFVEYYNNSFVSFDQGDQHRPSSALVNHFPLHDGATFIP* | 278 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pvu5g1040 | 277 | MobiDBLite | consensus disorder prediction | 120 | 142 | - | - | |
Pvu5g1040 | 277 | PANTHER | NAC TRANSCRIPTION FACTOR-LIKE PROTEIN | 1 | 276 | - | - | |
Pvu5g1040 | 277 | PANTHER | NAC DOMAIN-CONTAINING PROTEIN 73 | 1 | 276 | IPR044799 | GO:0003700 | |
Pvu5g1040 | 277 | MobiDBLite | consensus disorder prediction | 126 | 142 | - | - | |
Pvu5g1040 | 277 | SUPERFAMILY | NAC domain | 42 | 206 | IPR036093 | GO:0003677|GO:0006355 | |
Pvu5g1040 | 277 | Gene3D | NAC domain | 56 | 210 | IPR036093 | GO:0003677|GO:0006355 | |
Pvu5g1040 | 277 | Pfam | No apical meristem (NAM) protein | 48 | 187 | IPR003441 | GO:0003677|GO:0006355 | |
Pvu5g1040 | 277 | ProSiteProfiles | NAC domain profile. | 47 | 206 | IPR003441 | GO:0003677|GO:0006355 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pvu5g1040 | Pvu-Chr5 | 30203159 | 30205526 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pvu5g1040 | 23 | 277 | NAC Transcription Factor Family | AT4G28500 | 63.441 | 3.66e-118 | 339 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | NAC | Pvu5g1040 | NAM | 3.6e-22 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pvu5g1040 | - | - | gmx:100791648 | 549.28 |