Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g1040 ATGACTCAGTGCAGCTACCCTGAAAACAACCATACCATTGTGGAGAGGCACAAAGATAGCTTGATCAGAACATGTCCTACATGTGGACATCATATCAATTGCCAGGAGCAGGCTGCTGGAATTCATGACTTGCCTGGACTTCCTGCTGGAGTGAAGTTTGATCCTACTGATCAGGAGATTCTTGAGCATTTGGAAGCGAAGGTGCGCTCTGATATTCACAAGCTTCATCCGTTAATTGATGAGTTCATCCCTACTCTTGAAGGGGAAAATGGAATCTGCTGTACCCATCCAGAGAAGTTACCAGGAGTTAGCAAAGATGGGTTGATCCGACATTTCTTTCACAGGCCTTCCAAAGCATATACGACTGGAACAAGGAAAAGGAGAAAGGTGCACACAGATGCTGATGGCAGCGAGACAAGGTGGCACAAAACAGGTAAGACTAGGCCAGTCTTCATCAGTGGCAAGTTAAAAGGGTACAAGAAAATTCTTGTGCTTTACACTAACTACAGAAAACAAAGGAAACCTGAGAAGACAAACTGGGTCATGCATCAGTACCATCTTGGCAATAATGAAGAGGAGAAGGAAGGGGAGTTGGTGGTCTCCAAAGTTTTCTATCAAACACAGCCTAGACAATGTGGTTCACTCACGAAAGACTCATATCCTGCAAAACTAAATGGTGAAAGTGTGCACGAGGTAACTAATCATAAAAGCACTGGGTTTGTCGAGTACTACAATAATTCTTTTGTATCCTTTGATCAAGGGGACCAGCATAGGCCTAGCAGTGCACTAGTCAACCATTTCCCTCTCCATGATGGTGCTACATTCATTCCTTGA 834 0.4412 MTQCSYPENNHTIVERHKDSLIRTCPTCGHHINCQEQAAGIHDLPGLPAGVKFDPTDQEILEHLEAKVRSDIHKLHPLIDEFIPTLEGENGICCTHPEKLPGVSKDGLIRHFFHRPSKAYTTGTRKRRKVHTDADGSETRWHKTGKTRPVFISGKLKGYKKILVLYTNYRKQRKPEKTNWVMHQYHLGNNEEEKEGELVVSKVFYQTQPRQCGSLTKDSYPAKLNGESVHEVTNHKSTGFVEYYNNSFVSFDQGDQHRPSSALVNHFPLHDGATFIP* 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g1040 277 MobiDBLite consensus disorder prediction 120 142 - -
Pvu5g1040 277 PANTHER NAC TRANSCRIPTION FACTOR-LIKE PROTEIN 1 276 - -
Pvu5g1040 277 PANTHER NAC DOMAIN-CONTAINING PROTEIN 73 1 276 IPR044799 GO:0003700
Pvu5g1040 277 MobiDBLite consensus disorder prediction 126 142 - -
Pvu5g1040 277 SUPERFAMILY NAC domain 42 206 IPR036093 GO:0003677|GO:0006355
Pvu5g1040 277 Gene3D NAC domain 56 210 IPR036093 GO:0003677|GO:0006355
Pvu5g1040 277 Pfam No apical meristem (NAM) protein 48 187 IPR003441 GO:0003677|GO:0006355
Pvu5g1040 277 ProSiteProfiles NAC domain profile. 47 206 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g1040 Pvu-Chr5 30203159 30205526 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu5g1040 23 277 NAC Transcription Factor Family AT4G28500 63.441 3.66e-118 339
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Pvu5g1040 NAM 3.6e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g1040 - - gmx:100791648 549.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g1040 5 30203159 30205526 Pvu5g1040 5 30203159 30205526 ECH