Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g1027 AACTTACTTCGTGCCAGGGAACCACCCCAACCAGCTTTTCCTCACCACGAATACCAGCTCTCACCACCCATCACCACCACCACCACACCTGTGGTTTCCTCTATTTTAAAATTGAGTCGTGACCAACTCAACATCCTGAAGGGCAAGTCGAAAGAAGATGGCAACACAATAAACTATAGCACTTATGAGATGTTGGCAGCTCATATATGGAGAAGTGTGTGCAAAGCAAGAGGCCTTCCTGAAGTCCAAGAAACCAGACTATATATTCCAATTAATGGAAGGTCACGGCTGCAACCTCCCCTCCCTCCTGGTTACCTTGGCAATGCTATCTTCTCCACCATTCCCAAAGCATTGGCAGGAGATCTCGTGTCAAAACCTACATGGTATGCTGCAAATCAAATCCACAACGCAATAGCGAGAATGGACAACGAATATTTGAGATCAGCTCTTGACTATCTGAAGCTACAGCCTGATCTAAATGCTCTTGTTCCTGGAGCACATACTTTTGGGTGTCCAAATGTGGGTATCAATAGCTGGGCTAAGTTTCCAGTCTATGATGCTGACTTTGGTTGGGGAAGACCGATCTTCATGAGACCTGGCTGGATTATATACGAGGGGCTAGCAATCATAATTCCAAGCTCAACAAATGATGGCAGCTTGTATTTGAAAATGGCTCTACCACCTCACCATATGAAGCTGTTTCAAGAATTCCTTTATGACATTTGA 726 0.449 NLLRAREPPQPAFPHHEYQLSPPITTTTTPVVSSILKLSRDQLNILKGKSKEDGNTINYSTYEMLAAHIWRSVCKARGLPEVQETRLYIPINGRSRLQPPLPPGYLGNAIFSTIPKALAGDLVSKPTWYAANQIHNAIARMDNEYLRSALDYLKLQPDLNALVPGAHTFGCPNVGINSWAKFPVYDADFGWGRPIFMRPGWIIYEGLAIIIPSSTNDGSLYLKMALPPHHMKLFQEFLYDI* 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g1027 241 Pfam Transferase family 3 236 - -
Pvu5g1027 241 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 2 240 - -
Pvu5g1027 241 PANTHER SHIKIMATE/QUINATE HYDROXYCINNAMOYLTRANSFERASE 2 240 - -
Pvu5g1027 241 MobiDBLite consensus disorder prediction 1 21 - -
Pvu5g1027 241 Gene3D - 22 241 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g1027 Pvu-Chr5 29907080 29908031 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu5g1027 1 241 Monolignol Biosynthesis Gene Families AT5G48930 64.919 1.26e-116 338
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g1027 K13065 - pvu:PHAVU_005G0988001 372.859