Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g1026 ATGACGATTATTGTGAAGGAGTCGATAATGGTGCAACCCGCAGAGGCTACACCGCGGAAGGTGTTGTGGATGTCAAACATGGATTTGTTGGCGAGGAATTATCACAGTCCCAGCGTCTATTTCTACAACCCAAACGGGGCTTCCAATTTCTTTCATTCCAACATTCTGAAGGAAGCCCTAAGTAAGACCCTCGTCCTTTTCTACCCAATGGCCGCCCGCCTCCGCCACGATGACGACCACCGCGTGGAGATTTATTGTGACGGTCAGGGTGTACTTTTCGTTGAGGCACATGCCACCGTTGCCATGGATCACTTCACTCACAACCTTCACCATCGTAACCTTATTCCCGCGGTGGATTATTCTGCCGGGATTGAAACATATCCGTTAGTGGTGTTACAGGTAACATATTTCAAATGTGGTGGGGTCTCAATAGGCGTTGGTATAGAGCACCATGTAGCAGATGGAGAATCAGGTCTTCACTTCATCAATTCATGGTCGAATGTGGCTCGTGGCATCCCCATTTCTGTTCCCCCATTTATTGACAGGAACCTACTTC 556 0.4856 MTIIVKESIMVQPAEATPRKVLWMSNMDLLARNYHSPSVYFYNPNGASNFFHSNILKEALSKTLVLFYPMAARLRHDDDHRVEIYCDGQGVLFVEAHATVAMDHFTHNLHHRNLIPAVDYSAGIETYPLVVLQVTYFKCGGVSIGVGIEHHVADGESGLHFINSWSNVARGIPISVPPFIDRNLL 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g1026 185 Gene3D - 1 185 IPR023213 -
Pvu5g1026 185 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 4 185 - -
Pvu5g1026 185 PANTHER SHIKIMATE/QUINATE HYDROXYCINNAMOYLTRANSFERASE 4 185 - -
Pvu5g1026 185 Pfam Transferase family 3 184 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g1026 Pvu-Chr5 29795406 29796036 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu5g1026 1 185 Monolignol Biosynthesis Gene Families AT5G48930 59.574 8.31e-79 239
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g1026 K13065 - pvu:PHAVU_005G0988000 383.259