Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g1025 GATGGCAACACAATAAACTATAGCACTTATGAGATGTTGGCAGCTCATATGTGGAGATGTTTGTGCAAAGCAAGAGGCCTTCCTGAAGACCAAGAAACCAGACTATATATTCCAACTGATGGAAGGTCAAGGCTGCAACCTCCCCTCCCTCCTGGTTACCTTGGCAATGTTATCTTCTCCACCATTCCCAAAGCATTGGCAGGAGATCTCGTGTCAAAACCTACATGGTATGCTGCAAATCAAATCCACAACGCAATAGCGAGAATGGACAACGAATATTTGAGATCAGCTCTTGACTATCTGCAGCTACAACCTGATCTAAATGCTCTTGTTCGTGGAGCACATACTTTTGGGTGTCCAAATGTGGGTATCAATAGCTGGGCTAAGTTTCCAATCTATGATGCTGACTTTGGTTGGGGAAGACCGATCTTCATGAGACCTGGCTGGATTCTAAACGAGGGGCTATCAATCATAATTCCAAGCTCAACAAATGATGGCGGCTTGTATTTGGCAATGGCTCTACCACCTCACCATATGAAGCTGTTTCAAGAATTCCTTTATGACATTTGA 570 0.4404 DGNTINYSTYEMLAAHMWRCLCKARGLPEDQETRLYIPTDGRSRLQPPLPPGYLGNVIFSTIPKALAGDLVSKPTWYAANQIHNAIARMDNEYLRSALDYLQLQPDLNALVRGAHTFGCPNVGINSWAKFPIYDADFGWGRPIFMRPGWILNEGLSIIIPSSTNDGGLYLAMALPPHHMKLFQEFLYDI* 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g1025 189 Pfam Transferase family 8 184 - -
Pvu5g1025 189 Gene3D - 1 189 IPR023213 -
Pvu5g1025 189 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 1 188 - -
Pvu5g1025 189 PANTHER SHIKIMATE/QUINATE HYDROXYCINNAMOYLTRANSFERASE 1 188 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g1025 Pvu-Chr5 29794559 29795232 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu5g1025 1 189 Monolignol Biosynthesis Gene Families AT5G48930 70.370 2.85e-99 292
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g1025 K13065 - pvu:PHAVU_005G0988001 402.519