Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g1023 ATGACGATTAGTGTGAAGGAGTCGATAATGGTGCAACCCGCAGAGGCTACCCCGCGGAAGGTGTTGTGGAACTCAGACCTGGATTTGCTGGCGGGGAATTACCACATTCCCACCCTCTATTTCTACAACCCAAACGGGACATCCAATTTCTTCCATCCCAACATTCTGAAAGAAGCCCTAAGTAAGACCCTC 192 0.5 MTISVKESIMVQPAEATPRKVLWNSDLDLLAGNYHIPTLYFYNPNGTSNFFHPNILKEALSKTL 64
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g1023 64 Gene3D - 1 64 IPR023213 -
Pvu5g1023 64 Pfam Transferase family 2 64 - -
Pvu5g1023 64 PANTHER SHIKIMATE O-HYDROXYCINNAMOYLTRANSFERASE-LIKE 4 64 - -
Pvu5g1023 64 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 4 64 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g1023 Pvu-Chr5 29731099 29731290 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu5g1023 1 64 Monolignol Biosynthesis Gene Families AT5G48930 53.125 5.53e-20 79.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g1023 K13065 - pvu:PHAVU_005G098400g 134.42