Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g1022 GCTCATGCCACCGTTGCCATGGACCACTTCACTCACAACCTTAACCATAGCAACCTTATTCCCACGGTGGATTATTCTGCCGGGATTGAAACATATCCGTTAGTGGTGTTACAGGTAACATATTTCAGATGTGGAGGGGTCTCAATAGGCGTTGGTAAAGTGCACCATGTAGCAGATGGAGAATCAGGTGCTCACTTCATCAATTCATGGTCCAATGTGGCTCGTGGCATCCCCATTTCT 240 0.475 AHATVAMDHFTHNLNHSNLIPTVDYSAGIETYPLVVLQVTYFRCGGVSIGVGKVHHVADGESGAHFINSWSNVARGIPIS 80
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g1022 80 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 5 78 - -
Pvu5g1022 80 PANTHER SHIKIMATE/QUINATE HYDROXYCINNAMOYLTRANSFERASE 5 78 - -
Pvu5g1022 80 Pfam Transferase family 16 76 - -
Pvu5g1022 80 Gene3D - 1 80 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g1022 Pvu-Chr5 29730601 29730915 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu5g1022 10 80 Monolignol Biosynthesis Gene Families AT5G48930 60.563 3.48e-27 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g1022 K13065 - pvu:PHAVU_005G0986002 169.474