Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g1021 GGCAAGTCGAAAGAAGATGGCAACACAATAAACTATAGCACTTATGAGATGTTGGCAGCTCATATATGGAGAAGTGTGTCCAAAGCAAGAGGCCTTCCTGAAGACCAAGAAACCAGACTATATATTCCAATTAATGGAAGGTCAAGGCTGCAACCTCCCCTCCCTCCTGGTTACCTTGGCAATGCTATCTTCTCCACCATTCCCAAAGCTTGGCAGGAGATCTCAATAATGAGAATGGACAACGAATATTTGAGATCAGCTCTTGACTATCTGAAGCTACAGCCTGATCTAAATGCTCTTGTTCCTGGAGCACATACTTTTGGGTGTCCAGATGTGGGTATCAATAGCTGGGCTAAGTTTCCAGTCTATGATGCTGACTTTGGTTGGGGAAGACCGATCTTCATGAGACCTGGCTGGATTATATACGAGGGGCTAGCAATCATAATTCCAAGCTCAACAAATGATGGCAGCTTGTATTTGGCAATGACTCTACCACCTCACCATATGAAGCTGTTTCAAGAATTCTTTTATGACATTTGA 540 0.4352 GKSKEDGNTINYSTYEMLAAHIWRSVSKARGLPEDQETRLYIPINGRSRLQPPLPPGYLGNAIFSTIPKAWQEISIMRMDNEYLRSALDYLKLQPDLNALVPGAHTFGCPDVGINSWAKFPVYDADFGWGRPIFMRPGWIIYEGLAIIIPSSTNDGSLYLAMTLPPHHMKLFQEFFYDI* 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g1021 179 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 1 178 - -
Pvu5g1021 179 PANTHER SHIKIMATE/QUINATE HYDROXYCINNAMOYLTRANSFERASE 1 178 - -
Pvu5g1021 179 Gene3D - 1 179 IPR023213 -
Pvu5g1021 179 Pfam Transferase family 78 177 - -
Pvu5g1021 179 Pfam Transferase family 5 67 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g1021 Pvu-Chr5 29729843 29730426 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu5g1021 1 179 Monolignol Biosynthesis Gene Families AT5G48930 60.825 6.31e-83 249
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g1021 K13065 - pvu:PHAVU_005G0988001 315.079