Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g1018 ATGACGATTAGTGTGAAGGAGTCGATAATGGTGCAACCCGCAGAGGCTACCCCGCGGAAGGTGTTGTGGAACTCAGACCTGGATTTGCTGGCGGGGAATTACCACATTCCCACCCTCTATTTCTACAACCCAAACGGGACATCCAATTTCTTCCATCCCAACATTCTGAAAGAAGCCCTAAGTAAGACCCTCGTCCTTTTCTACCCAATGGCCGCCCGCCTCCGCCACGGTGACGACCACCGCATGGAGATTTATTGTGACGGTCAGGGTGTACTTTTCGTTGAGGCTCATGCCACCGTTGCCATGGACCACTTCACTCACAACCTTAACCATAGCAACCTTATTCCCACGGTGGATTATTCTGCCGGGATTGAAACATATCCGTTAGTGGTGTTACAGGTGCGTTCCTTTTCTTTCTCTTTGTAA 426 0.5023 MTISVKESIMVQPAEATPRKVLWNSDLDLLAGNYHIPTLYFYNPNGTSNFFHPNILKEALSKTLVLFYPMAARLRHGDDHRMEIYCDGQGVLFVEAHATVAMDHFTHNLNHSNLIPTVDYSAGIETYPLVVLQVRSFSFSL* 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g1018 141 Gene3D - 1 140 IPR023213 -
Pvu5g1018 141 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 4 137 - -
Pvu5g1018 141 PANTHER SHIKIMATE/QUINATE HYDROXYCINNAMOYLTRANSFERASE 4 137 - -
Pvu5g1018 141 Pfam Transferase family 2 137 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g1018 Pvu-Chr5 29708872 29709663 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu5g1018 1 138 Monolignol Biosynthesis Gene Families AT5G48930 53.191 2.13e-46 154
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g1018 K13065 - pvu:PHAVU_005G098400g 291.582