Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g1017 ATGACGATTAGTGTGAAGGAGTCGATAATGCTGCAACCCGTGGAAGGTGTTGTGGAACTCAAACCTAGATTTGCTGGCGGAGAATTACCACATTCCCACCATCTATTCTACAACCCAAACAAGACATCCAATTTCTTCTATCCCAACATTCTGAAAGAAGCCCTAAGTAAGAACCTCGTCCTCTTCTACGCAATGGCCGACCGCCTCCGCCACGAAGACGACCACCGCGTGGGGATTTATTGTGACGGTCAGGGTGTACTTTTCATTGAGGCTCATGCCATCGTTGCCATGGACCACTTCACTCACAACCTTAACCATAACAACCTTATTCCCGCGGTGGATTATTCTGCCGGGATTGAAACATATCCGTTAGTGGTGTTACAGGTAACATATTTCAGATGTGGAGGGGTCTCAATAGGCGTTGATTATGAGCACCATGTAGAAGATGGAGAATCAGGTGTTCACTTCATCAACTCATGGTCCAATGTGGCTCATGGCATCCCCATTTATGGATCCACCTCAACCAGCTTTCCTCACCACGAATACCAACTCTCACCACCCATCATCACCACCACCACCACCACCACCACAACTGTGGTTGCCTCTATTTTAAAATTGAGTCGTGACCAACTCAACATCCTCAAGGACAAGTCGAAAGAAGATGGCAACACAATAAACTATAGCACTTATGAAATGTTGGCAGCTCATATATGGAGAAGTGCGTGCAAAGCAAGAGGCCTTCCTGAAGACCAAGAAACCAGACTATATATTCCAATTAATGGAAGGTCAAGGTTGAAACCTCCCCTCCCTCCTGGTTACCTTGGCAATGTTATCTTCTCCACCATTCCCACAGGATTCGCAGGAGATCTCGTAATGGACAACGGATATTTGAGATCAGCTCTTGACTATCTGCAACTACAGCCTGATCTAAATGCTCTTGTTCCTGGACGACATACTTATGCGTGTCCAGATGTGGGTATCAATAGCTGGGCTAAGTTTCCAATCTATGATGCTGACTTTGGTTGGGGCAGACTGATCTTCATGAGACTTGGCTGGATTATATACGAGGGGCTAGCAATCATACTTCCAAGCTCAACAAATGATGGCAGCTTGTATTTGAGAATAGCTCTACCACCTCATCATATGAAGCTGTTTCAAGAATCCCTTTATGGCATTTGA 1179 0.4563 MTISVKESIMLQPVEGVVELKPRFAGGELPHSHHLFYNPNKTSNFFYPNILKEALSKNLVLFYAMADRLRHEDDHRVGIYCDGQGVLFIEAHAIVAMDHFTHNLNHNNLIPAVDYSAGIETYPLVVLQVTYFRCGGVSIGVDYEHHVEDGESGVHFINSWSNVAHGIPIYGSTSTSFPHHEYQLSPPIITTTTTTTTTVVASILKLSRDQLNILKDKSKEDGNTINYSTYEMLAAHIWRSACKARGLPEDQETRLYIPINGRSRLKPPLPPGYLGNVIFSTIPTGFAGDLVMDNGYLRSALDYLQLQPDLNALVPGRHTYACPDVGINSWAKFPIYDADFGWGRLIFMRLGWIIYEGLAIILPSSTNDGSLYLRIALPPHHMKLFQESLYGI* 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g1017 392 Pfam Transferase family 292 388 - -
Pvu5g1017 392 Pfam Transferase family 35 283 - -
Pvu5g1017 392 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 35 390 - -
Pvu5g1017 392 PANTHER SHIKIMATE/QUINATE HYDROXYCINNAMOYLTRANSFERASE 35 390 - -
Pvu5g1017 392 Gene3D - 192 392 IPR023213 -
Pvu5g1017 392 Gene3D - 26 191 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g1017 Pvu-Chr5 29636809 29638145 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu5g1017 1 392 Monolignol Biosynthesis Gene Families AT5G48930 51.136 1.01e-144 416
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g1017 K13065 - zju:107406305 431.024