Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g1016 ATGACGATTATTGTGAAGGAGTCGATAATGGTGCAATCCGCAGAGGCTACCCCGCGGAAGGTGTTGTGGAACTCAGACCTGGATTTGTTGGTGGGGAATTACCACACTCCCACCGTCTATTTCTACAACCCAAACGGGGTTTCCAATTTCTTCCATCCCAACATTCTAAAGGAAGCCCTAAGTAAGACCCTCGTCCTTTTCTACCCAATGGTCACGGTGACGATCACCGCGTGGAGATTTATTGTGACG 249 0.49 MTIIVKESIMVQSAEATPRKVLWNSDLDLLVGNYHTPTVYFYNPNGVSNFFHPNILKEALSKTLVLFYPMVTVTITAWRFIVT 83
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g1016 83 Pfam Transferase family 3 70 - -
Pvu5g1016 83 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 4 72 - -
Pvu5g1016 83 PANTHER SHIKIMATE/QUINATE HYDROXYCINNAMOYLTRANSFERASE 4 72 - -
Pvu5g1016 83 Gene3D - 2 74 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g1016 Pvu-Chr5 29327854 29328102 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu5g1016 1 70 Monolignol Biosynthesis Gene Families AT5G48930 57.143 4.56e-24 91.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g1016 K13065 - pvu:PHAVU_005G098200g 171.4